Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC20.53■□□□□ 0.88
CPT1AP50416 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CPT1AP50416 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
CPT1AP50416 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CPT1AP50416 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC20.53■□□□□ 0.88
CPT1AP50416 AC004263.2-201ENST00000617183 678 ntBASIC20.53■□□□□ 0.88
CPT1AP50416 REXO1L6P-202ENST00000619970 1078 ntBASIC20.53■□□□□ 0.88
CPT1AP50416 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC20.53■□□□□ 0.88
CPT1AP50416 VPS51-217ENST00000639871 243 ntTSL 5 BASIC20.53■□□□□ 0.88
CPT1AP50416 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.53■□□□□ 0.88
CPT1AP50416 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CPT1AP50416 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CPT1AP50416 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CPT1AP50416 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
CPT1AP50416 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CPT1AP50416 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CPT1AP50416 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CPT1AP50416 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CPT1AP50416 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CPT1AP50416 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
CPT1AP50416 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
CPT1AP50416 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.52■□□□□ 0.88
CPT1AP50416 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CPT1AP50416 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CPT1AP50416 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CPT1AP50416 AKR1C7P-201ENST00000305623 895 ntBASIC20.52■□□□□ 0.88
CPT1AP50416 POM121L3P-201ENST00000419331 1163 ntBASIC20.52■□□□□ 0.88
CPT1AP50416 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC20.52■□□□□ 0.88
CPT1AP50416 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC20.52■□□□□ 0.88
CPT1AP50416 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC20.52■□□□□ 0.88
CPT1AP50416 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC20.52■□□□□ 0.88
CPT1AP50416 AC091607.1-201ENST00000490318 1060 ntBASIC20.52■□□□□ 0.88
CPT1AP50416 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC20.52■□□□□ 0.88
CPT1AP50416 AC079776.4-201ENST00000511039 504 ntBASIC20.52■□□□□ 0.88
CPT1AP50416 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC20.52■□□□□ 0.88
CPT1AP50416 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.52■□□□□ 0.88
CPT1AP50416 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC20.52■□□□□ 0.88
CPT1AP50416 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC20.52■□□□□ 0.88
CPT1AP50416 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CPT1AP50416 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CPT1AP50416 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.52■□□□□ 0.88
CPT1AP50416 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CPT1AP50416 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CPT1AP50416 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
CPT1AP50416 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CPT1AP50416 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.52■□□□□ 0.87
CPT1AP50416 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.52■□□□□ 0.87
CPT1AP50416 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CPT1AP50416 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CPT1AP50416 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CPT1AP50416 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CPT1AP50416 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CPT1AP50416 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CPT1AP50416 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CPT1AP50416 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CPT1AP50416 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC20.51■□□□□ 0.87
CPT1AP50416 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CPT1AP50416 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC20.51■□□□□ 0.87
CPT1AP50416 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CPT1AP50416 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.51■□□□□ 0.87
CPT1AP50416 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CPT1AP50416 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
CPT1AP50416 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CPT1AP50416 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.51■□□□□ 0.87
CPT1AP50416 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CPT1AP50416 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CPT1AP50416 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CPT1AP50416 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CPT1AP50416 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.51■□□□□ 0.87
CPT1AP50416 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC20.51■□□□□ 0.87
CPT1AP50416 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
CPT1AP50416 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPT1AP50416 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CPT1AP50416 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CPT1AP50416 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPT1AP50416 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CPT1AP50416 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPT1AP50416 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPT1AP50416 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPT1AP50416 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.5■□□□□ 0.87
CPT1AP50416 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
CPT1AP50416 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPT1AP50416 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPT1AP50416 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPT1AP50416 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPT1AP50416 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPT1AP50416 MIR149-201ENST00000384879 89 ntBASIC20.5■□□□□ 0.87
CPT1AP50416 MRPL3P1-201ENST00000400109 1033 ntBASIC20.5■□□□□ 0.87
CPT1AP50416 LSM5-204ENST00000409909 740 ntTSL 2 BASIC20.5■□□□□ 0.87
CPT1AP50416 PENK-208ENST00000523051 772 ntTSL 5 BASIC20.5■□□□□ 0.87
CPT1AP50416 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPT1AP50416 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.5■□□□□ 0.87
CPT1AP50416 ANKRD20A8P-203ENST00000641373 517 ntBASIC20.5■□□□□ 0.87
CPT1AP50416 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CPT1AP50416 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.5■□□□□ 0.87
CPT1AP50416 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.5■□□□□ 0.87
CPT1AP50416 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPT1AP50416 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CPT1AP50416 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC20.5■□□□□ 0.87
CPT1AP50416 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms