Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.02■□□□□ 0.32
SLC9A3P48764 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
SLC9A3P48764 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.02■□□□□ 0.32
SLC9A3P48764 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC9A3P48764 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.02■□□□□ 0.32
SLC9A3P48764 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC9A3P48764 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SLC9A3P48764 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC9A3P48764 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SLC9A3P48764 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.02■□□□□ 0.32
SLC9A3P48764 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SLC9A3P48764 AC026271.3-201ENST00000571884 352 ntBASIC17.02■□□□□ 0.32
SLC9A3P48764 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.02■□□□□ 0.32
SLC9A3P48764 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.02■□□□□ 0.32
SLC9A3P48764 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
SLC9A3P48764 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.02■□□□□ 0.32
SLC9A3P48764 AC068587.9-201ENST00000641814 219 ntBASIC17.02■□□□□ 0.32
SLC9A3P48764 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.02■□□□□ 0.32
SLC9A3P48764 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SLC9A3P48764 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SLC9A3P48764 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SLC9A3P48764 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.02■□□□□ 0.31
SLC9A3P48764 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SLC9A3P48764 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.02■□□□□ 0.31
SLC9A3P48764 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SLC9A3P48764 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SLC9A3P48764 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SLC9A3P48764 ABALON-201ENST00000629058 1903 ntBASIC17.02■□□□□ 0.31
SLC9A3P48764 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
SLC9A3P48764 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.01■□□□□ 0.31
SLC9A3P48764 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC9A3P48764 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
SLC9A3P48764 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SLC9A3P48764 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC9A3P48764 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SLC9A3P48764 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
SLC9A3P48764 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SLC9A3P48764 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC9A3P48764 KRT8P32-201ENST00000512863 1461 ntBASIC17.01■□□□□ 0.31
SLC9A3P48764 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SLC9A3P48764 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC9A3P48764 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.01■□□□□ 0.31
SLC9A3P48764 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.01■□□□□ 0.31
SLC9A3P48764 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.01■□□□□ 0.31
SLC9A3P48764 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
SLC9A3P48764 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.01■□□□□ 0.31
SLC9A3P48764 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SLC9A3P48764 MYC-208ENST00000641036 567 ntBASIC17.01■□□□□ 0.31
SLC9A3P48764 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC9A3P48764 KRT16P1-201ENST00000399124 1418 ntBASIC17.01■□□□□ 0.31
SLC9A3P48764 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.01■□□□□ 0.31
SLC9A3P48764 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SLC9A3P48764 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
SLC9A3P48764 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC9A3P48764 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SLC9A3P48764 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.01■□□□□ 0.31
SLC9A3P48764 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SLC9A3P48764 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC9A3P48764 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
SLC9A3P48764 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.01■□□□□ 0.31
SLC9A3P48764 AC126763.1-201ENST00000552015 2118 ntBASIC17■□□□□ 0.31
SLC9A3P48764 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
SLC9A3P48764 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
SLC9A3P48764 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17■□□□□ 0.31
SLC9A3P48764 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
SLC9A3P48764 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
SLC9A3P48764 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17■□□□□ 0.31
SLC9A3P48764 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
SLC9A3P48764 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC9A3P48764 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC9A3P48764 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC9A3P48764 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17■□□□□ 0.31
SLC9A3P48764 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC9A3P48764 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC9A3P48764 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17■□□□□ 0.31
SLC9A3P48764 AC004951.3-201ENST00000418645 1148 ntBASIC17■□□□□ 0.31
SLC9A3P48764 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17■□□□□ 0.31
SLC9A3P48764 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
SLC9A3P48764 AC067852.2-201ENST00000590513 2313 ntBASIC17■□□□□ 0.31
SLC9A3P48764 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17■□□□□ 0.31
SLC9A3P48764 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17■□□□□ 0.31
SLC9A3P48764 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17■□□□□ 0.31
SLC9A3P48764 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC9A3P48764 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17■□□□□ 0.31
SLC9A3P48764 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17■□□□□ 0.31
SLC9A3P48764 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
SLC9A3P48764 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC9A3P48764 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.99■□□□□ 0.31
SLC9A3P48764 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.99■□□□□ 0.31
SLC9A3P48764 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
SLC9A3P48764 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC9A3P48764 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.99■□□□□ 0.31
SLC9A3P48764 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC9A3P48764 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.99■□□□□ 0.31
SLC9A3P48764 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
SLC9A3P48764 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
SLC9A3P48764 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC9A3P48764 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC9A3P48764 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.99■□□□□ 0.31
SLC9A3P48764 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms