Protein–RNA interactions for Protein: P46094

XCR1, Chemokine XC receptor 1, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1P46094 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
XCR1P46094 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.7■□□□□ 0.42
XCR1P46094 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
XCR1P46094 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
XCR1P46094 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
XCR1P46094 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
XCR1P46094 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
XCR1P46094 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
XCR1P46094 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
XCR1P46094 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.69■□□□□ 0.42
XCR1P46094 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.69■□□□□ 0.42
XCR1P46094 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
XCR1P46094 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
XCR1P46094 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.69■□□□□ 0.42
XCR1P46094 AL109659.2-201ENST00000606809 1674 ntBASIC17.69■□□□□ 0.42
XCR1P46094 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
XCR1P46094 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.69■□□□□ 0.42
XCR1P46094 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
XCR1P46094 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
XCR1P46094 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
XCR1P46094 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.69■□□□□ 0.42
XCR1P46094 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
XCR1P46094 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
XCR1P46094 MIR1224-201ENST00000408193 85 ntBASIC17.69■□□□□ 0.42
XCR1P46094 AK4P3-201ENST00000418260 669 ntBASIC17.69■□□□□ 0.42
XCR1P46094 AC117947.1-201ENST00000427448 529 ntBASIC17.69■□□□□ 0.42
XCR1P46094 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
XCR1P46094 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.69■□□□□ 0.42
XCR1P46094 AL049597.2-201ENST00000565575 961 ntBASIC17.69■□□□□ 0.42
XCR1P46094 WWOX-216ENST00000569818 525 ntBASIC17.69■□□□□ 0.42
XCR1P46094 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
XCR1P46094 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.69■□□□□ 0.42
XCR1P46094 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.69■□□□□ 0.42
XCR1P46094 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
XCR1P46094 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.69■□□□□ 0.42
XCR1P46094 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
XCR1P46094 AC008556.1-201ENST00000610908 2040 ntBASIC17.69■□□□□ 0.42
XCR1P46094 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
XCR1P46094 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
XCR1P46094 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
XCR1P46094 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.68■□□□□ 0.42
XCR1P46094 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.68■□□□□ 0.42
XCR1P46094 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
XCR1P46094 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.68■□□□□ 0.42
XCR1P46094 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
XCR1P46094 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
XCR1P46094 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.68■□□□□ 0.42
XCR1P46094 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.68■□□□□ 0.42
XCR1P46094 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
XCR1P46094 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
XCR1P46094 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.68■□□□□ 0.42
XCR1P46094 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.68■□□□□ 0.42
XCR1P46094 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
XCR1P46094 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
XCR1P46094 AP000523.1-201ENST00000398242 1049 ntBASIC17.68■□□□□ 0.42
XCR1P46094 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.68■□□□□ 0.42
XCR1P46094 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
XCR1P46094 DUX4L26-201ENST00000489078 1255 ntBASIC17.68■□□□□ 0.42
XCR1P46094 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.68■□□□□ 0.42
XCR1P46094 AC010331.1-201ENST00000611423 582 ntBASIC17.68■□□□□ 0.42
XCR1P46094 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
XCR1P46094 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
XCR1P46094 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
XCR1P46094 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
XCR1P46094 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
XCR1P46094 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
XCR1P46094 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
XCR1P46094 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
XCR1P46094 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
XCR1P46094 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
XCR1P46094 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
XCR1P46094 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
XCR1P46094 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.67■□□□□ 0.42
XCR1P46094 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
XCR1P46094 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
XCR1P46094 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
XCR1P46094 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
XCR1P46094 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
XCR1P46094 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
XCR1P46094 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.67■□□□□ 0.42
XCR1P46094 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
XCR1P46094 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
XCR1P46094 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
XCR1P46094 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
XCR1P46094 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
XCR1P46094 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
XCR1P46094 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
XCR1P46094 YBX1P2-201ENST00000489612 999 ntBASIC17.67■□□□□ 0.42
XCR1P46094 NEK4P2-201ENST00000580004 1012 ntBASIC17.67■□□□□ 0.42
XCR1P46094 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.67■□□□□ 0.42
XCR1P46094 AL023973.1-201ENST00000624619 620 ntBASIC17.67■□□□□ 0.42
XCR1P46094 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.67■□□□□ 0.42
XCR1P46094 BICD1-207ENST00000551848 1962 ntBASIC17.67■□□□□ 0.42
XCR1P46094 AC026471.1-201ENST00000564629 3026 ntBASIC17.67■□□□□ 0.42
XCR1P46094 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
XCR1P46094 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
XCR1P46094 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
XCR1P46094 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
XCR1P46094 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
XCR1P46094 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms