Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AC093677.2-201ENST00000600169 1863 ntBASIC15.2■□□□□ 0.02
NKX2-1P43699 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
NKX2-1P43699 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
NKX2-1P43699 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
NKX2-1P43699 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
NKX2-1P43699 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
NKX2-1P43699 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NKX2-1P43699 RCC2P6-201ENST00000526625 1557 ntBASIC15.19■□□□□ 0.02
NKX2-1P43699 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NKX2-1P43699 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC15.19■□□□□ 0.02
NKX2-1P43699 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NKX2-1P43699 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NKX2-1P43699 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
NKX2-1P43699 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC15.19■□□□□ 0.02
NKX2-1P43699 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC15.19■□□□□ 0.02
NKX2-1P43699 MTMR9LP-203ENST00000426597 1545 ntBASIC15.19■□□□□ 0.02
NKX2-1P43699 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
NKX2-1P43699 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC15.19■□□□□ 0.02
NKX2-1P43699 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
NKX2-1P43699 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NKX2-1P43699 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NKX2-1P43699 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
NKX2-1P43699 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NKX2-1P43699 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NKX2-1P43699 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC15.19■□□□□ 0.02
NKX2-1P43699 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC15.19■□□□□ 0.02
NKX2-1P43699 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC15.19■□□□□ 0.02
NKX2-1P43699 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NKX2-1P43699 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC15.19■□□□□ 0.02
NKX2-1P43699 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC15.19■□□□□ 0.02
NKX2-1P43699 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
NKX2-1P43699 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC15.19■□□□□ 0.02
NKX2-1P43699 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NKX2-1P43699 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NKX2-1P43699 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
NKX2-1P43699 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC15.19■□□□□ 0.02
NKX2-1P43699 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NKX2-1P43699 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC15.19■□□□□ 0.02
NKX2-1P43699 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
NKX2-1P43699 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
NKX2-1P43699 KATNBL1P6-202ENST00000562413 1466 ntBASIC15.19■□□□□ 0.02
NKX2-1P43699 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
NKX2-1P43699 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
NKX2-1P43699 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NKX2-1P43699 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
NKX2-1P43699 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
NKX2-1P43699 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NKX2-1P43699 NFYC-AS1-201ENST00000606277 1687 ntBASIC15.19■□□□□ 0.02
NKX2-1P43699 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NKX2-1P43699 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
NKX2-1P43699 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NKX2-1P43699 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NKX2-1P43699 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
NKX2-1P43699 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.18■□□□□ 0.02
NKX2-1P43699 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NKX2-1P43699 AC112777.1-201ENST00000540175 1423 ntBASIC15.18■□□□□ 0.02
NKX2-1P43699 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NKX2-1P43699 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
NKX2-1P43699 AC012317.2-201ENST00000623305 2251 ntBASIC15.18■□□□□ 0.02
NKX2-1P43699 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
NKX2-1P43699 AC009053.2-201ENST00000563701 2365 ntBASIC15.18■□□□□ 0.02
NKX2-1P43699 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NKX2-1P43699 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
NKX2-1P43699 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
NKX2-1P43699 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NKX2-1P43699 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC15.18■□□□□ 0.02
NKX2-1P43699 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NKX2-1P43699 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
NKX2-1P43699 NME6-213ENST00000451657 871 ntTSL 2 BASIC15.18■□□□□ 0.02
NKX2-1P43699 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC15.18■□□□□ 0.02
NKX2-1P43699 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC15.18■□□□□ 0.02
NKX2-1P43699 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC15.18■□□□□ 0.02
NKX2-1P43699 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NKX2-1P43699 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC15.18■□□□□ 0.02
NKX2-1P43699 MAZ-216ENST00000616501 991 ntTSL 5 BASIC15.18■□□□□ 0.02
NKX2-1P43699 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC15.18■□□□□ 0.02
NKX2-1P43699 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NKX2-1P43699 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC15.18■□□□□ 0.02
NKX2-1P43699 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.18■□□□□ 0.02
NKX2-1P43699 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC15.18■□□□□ 0.02
NKX2-1P43699 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NKX2-1P43699 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NKX2-1P43699 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC15.18■□□□□ 0.02
NKX2-1P43699 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
NKX2-1P43699 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NKX2-1P43699 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
NKX2-1P43699 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
NKX2-1P43699 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
NKX2-1P43699 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC15.17■□□□□ 0.02
NKX2-1P43699 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NKX2-1P43699 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
NKX2-1P43699 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC15.17■□□□□ 0.02
NKX2-1P43699 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NKX2-1P43699 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NKX2-1P43699 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NKX2-1P43699 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NKX2-1P43699 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NKX2-1P43699 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC15.17■□□□□ 0.02
NKX2-1P43699 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NKX2-1P43699 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms