Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MTHFRP42898 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
MTHFRP42898 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
MTHFRP42898 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
MTHFRP42898 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.39■□□□□ 0.69
MTHFRP42898 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MTHFRP42898 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MTHFRP42898 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
MTHFRP42898 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MTHFRP42898 KRT18P13-201ENST00000400056 1290 ntBASIC19.39■□□□□ 0.69
MTHFRP42898 NUS1P2-201ENST00000417358 873 ntBASIC19.39■□□□□ 0.69
MTHFRP42898 RPP21-221ENST00000428040 594 ntTSL 2 BASIC19.39■□□□□ 0.69
MTHFRP42898 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
MTHFRP42898 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MTHFRP42898 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC19.39■□□□□ 0.69
MTHFRP42898 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
MTHFRP42898 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC19.39■□□□□ 0.69
MTHFRP42898 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.39■□□□□ 0.69
MTHFRP42898 AF228730.7-201ENST00000641842 219 ntBASIC19.39■□□□□ 0.69
MTHFRP42898 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
MTHFRP42898 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.39■□□□□ 0.69
MTHFRP42898 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MTHFRP42898 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.39■□□□□ 0.69
MTHFRP42898 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MTHFRP42898 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
MTHFRP42898 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
MTHFRP42898 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.39■□□□□ 0.69
MTHFRP42898 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MTHFRP42898 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.39■□□□□ 0.69
MTHFRP42898 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MTHFRP42898 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
MTHFRP42898 LSM5-204ENST00000409909 740 ntTSL 2 BASIC19.38■□□□□ 0.69
MTHFRP42898 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MTHFRP42898 AF238378.1-201ENST00000526806 358 ntBASIC19.38■□□□□ 0.69
MTHFRP42898 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
MTHFRP42898 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC19.38■□□□□ 0.69
MTHFRP42898 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.38■□□□□ 0.69
MTHFRP42898 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.38■□□□□ 0.69
MTHFRP42898 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.38■□□□□ 0.69
MTHFRP42898 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC19.38■□□□□ 0.69
MTHFRP42898 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC19.38■□□□□ 0.69
MTHFRP42898 AL773604.1-201ENST00000617417 272 ntBASIC19.38■□□□□ 0.69
MTHFRP42898 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.38■□□□□ 0.69
MTHFRP42898 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.38■□□□□ 0.69
MTHFRP42898 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.37■□□□□ 0.69
MTHFRP42898 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MTHFRP42898 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MTHFRP42898 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.37■□□□□ 0.69
MTHFRP42898 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.37■□□□□ 0.69
MTHFRP42898 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MTHFRP42898 AC034236.2-201ENST00000606662 1610 ntBASIC19.37■□□□□ 0.69
MTHFRP42898 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
MTHFRP42898 IL9RP2-201ENST00000423948 1312 ntBASIC19.37■□□□□ 0.69
MTHFRP42898 TLE1-202ENST00000376484 666 ntTSL 3 BASIC19.37■□□□□ 0.69
MTHFRP42898 MIR574-201ENST00000385209 96 ntBASIC19.37■□□□□ 0.69
MTHFRP42898 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MTHFRP42898 MINOS1P3-201ENST00000457048 203 ntBASIC19.37■□□□□ 0.69
MTHFRP42898 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.37■□□□□ 0.69
MTHFRP42898 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC19.37■□□□□ 0.69
MTHFRP42898 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MTHFRP42898 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MTHFRP42898 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MTHFRP42898 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MTHFRP42898 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
MTHFRP42898 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MTHFRP42898 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MTHFRP42898 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.36■□□□□ 0.69
MTHFRP42898 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MTHFRP42898 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
MTHFRP42898 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
MTHFRP42898 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MTHFRP42898 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MTHFRP42898 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MTHFRP42898 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
MTHFRP42898 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
MTHFRP42898 POM121L3P-201ENST00000419331 1163 ntBASIC19.36■□□□□ 0.69
MTHFRP42898 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
MTHFRP42898 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC19.36■□□□□ 0.69
MTHFRP42898 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
MTHFRP42898 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
MTHFRP42898 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.36■□□□□ 0.69
MTHFRP42898 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC19.36■□□□□ 0.69
MTHFRP42898 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC19.36■□□□□ 0.69
MTHFRP42898 AC009065.1-201ENST00000564055 1225 ntBASIC19.36■□□□□ 0.69
MTHFRP42898 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.36■□□□□ 0.69
MTHFRP42898 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
MTHFRP42898 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.36■□□□□ 0.69
MTHFRP42898 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
MTHFRP42898 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MTHFRP42898 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MTHFRP42898 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
MTHFRP42898 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MTHFRP42898 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
MTHFRP42898 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
MTHFRP42898 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
MTHFRP42898 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MTHFRP42898 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.35■□□□□ 0.69
MTHFRP42898 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
MTHFRP42898 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.35■□□□□ 0.69
MTHFRP42898 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms