Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.29■□□□□ 0.68
SCNN1AP37088 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCNN1AP37088 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.29■□□□□ 0.68
SCNN1AP37088 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SCNN1AP37088 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCNN1AP37088 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCNN1AP37088 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCNN1AP37088 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCNN1AP37088 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SCNN1AP37088 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCNN1AP37088 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCNN1AP37088 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.28■□□□□ 0.68
SCNN1AP37088 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCNN1AP37088 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCNN1AP37088 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCNN1AP37088 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SCNN1AP37088 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCNN1AP37088 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SCNN1AP37088 AC117947.1-201ENST00000427448 529 ntBASIC19.28■□□□□ 0.68
SCNN1AP37088 YBX1P2-201ENST00000489612 999 ntBASIC19.28■□□□□ 0.68
SCNN1AP37088 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.28■□□□□ 0.68
SCNN1AP37088 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.28■□□□□ 0.68
SCNN1AP37088 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
SCNN1AP37088 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.28■□□□□ 0.68
SCNN1AP37088 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.28■□□□□ 0.68
SCNN1AP37088 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.28■□□□□ 0.68
SCNN1AP37088 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SCNN1AP37088 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCNN1AP37088 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.28■□□□□ 0.68
SCNN1AP37088 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.28■□□□□ 0.68
SCNN1AP37088 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.28■□□□□ 0.68
SCNN1AP37088 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.28■□□□□ 0.68
SCNN1AP37088 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SCNN1AP37088 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SCNN1AP37088 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SCNN1AP37088 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SCNN1AP37088 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SCNN1AP37088 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SCNN1AP37088 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SCNN1AP37088 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SCNN1AP37088 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SCNN1AP37088 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SCNN1AP37088 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SCNN1AP37088 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SCNN1AP37088 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.27■□□□□ 0.68
SCNN1AP37088 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.27■□□□□ 0.68
SCNN1AP37088 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.27■□□□□ 0.68
SCNN1AP37088 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.27■□□□□ 0.68
SCNN1AP37088 AC139887.4-201ENST00000607877 719 ntBASIC19.27■□□□□ 0.68
SCNN1AP37088 AC011558.1-201ENST00000623459 338 ntBASIC19.27■□□□□ 0.68
SCNN1AP37088 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SCNN1AP37088 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SCNN1AP37088 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
SCNN1AP37088 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SCNN1AP37088 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
SCNN1AP37088 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SCNN1AP37088 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
SCNN1AP37088 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCNN1AP37088 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.26■□□□□ 0.67
SCNN1AP37088 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCNN1AP37088 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SCNN1AP37088 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.26■□□□□ 0.67
SCNN1AP37088 BICD1-207ENST00000551848 1962 ntBASIC19.26■□□□□ 0.67
SCNN1AP37088 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.26■□□□□ 0.67
SCNN1AP37088 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCNN1AP37088 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCNN1AP37088 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SCNN1AP37088 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCNN1AP37088 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCNN1AP37088 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
SCNN1AP37088 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCNN1AP37088 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SCNN1AP37088 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SCNN1AP37088 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SCNN1AP37088 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SCNN1AP37088 STARP1-201ENST00000397973 869 ntBASIC19.26■□□□□ 0.67
SCNN1AP37088 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
SCNN1AP37088 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCNN1AP37088 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SCNN1AP37088 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SCNN1AP37088 RCN1P1-201ENST00000400413 996 ntBASIC19.26■□□□□ 0.67
SCNN1AP37088 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.26■□□□□ 0.67
SCNN1AP37088 PVRIG2P-201ENST00000435460 978 ntBASIC19.26■□□□□ 0.67
SCNN1AP37088 KRT18P57-201ENST00000443599 1254 ntBASIC19.26■□□□□ 0.67
SCNN1AP37088 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.26■□□□□ 0.67
SCNN1AP37088 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.26■□□□□ 0.67
SCNN1AP37088 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCNN1AP37088 AC006011.2-201ENST00000621313 1158 ntBASIC19.26■□□□□ 0.67
SCNN1AP37088 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SCNN1AP37088 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCNN1AP37088 GMCL1P1-201ENST00000463439 1581 ntBASIC19.26■□□□□ 0.67
SCNN1AP37088 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.26■□□□□ 0.67
SCNN1AP37088 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCNN1AP37088 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
SCNN1AP37088 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SCNN1AP37088 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SCNN1AP37088 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SCNN1AP37088 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCNN1AP37088 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.25■□□□□ 0.67
SCNN1AP37088 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms