Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GDF1P27539 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GDF1P27539 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
GDF1P27539 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.82■□□□□ 0.28
GDF1P27539 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GDF1P27539 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GDF1P27539 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.82■□□□□ 0.28
GDF1P27539 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.82■□□□□ 0.28
GDF1P27539 AL136038.3-201ENST00000561909 1096 ntBASIC16.82■□□□□ 0.28
GDF1P27539 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.82■□□□□ 0.28
GDF1P27539 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.82■□□□□ 0.28
GDF1P27539 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.82■□□□□ 0.28
GDF1P27539 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.82■□□□□ 0.28
GDF1P27539 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GDF1P27539 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC16.82■□□□□ 0.28
GDF1P27539 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
GDF1P27539 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.82■□□□□ 0.28
GDF1P27539 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.82■□□□□ 0.28
GDF1P27539 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GDF1P27539 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
GDF1P27539 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
GDF1P27539 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
GDF1P27539 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GDF1P27539 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GDF1P27539 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GDF1P27539 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.81■□□□□ 0.28
GDF1P27539 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
GDF1P27539 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GDF1P27539 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GDF1P27539 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GDF1P27539 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
GDF1P27539 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.81■□□□□ 0.28
GDF1P27539 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GDF1P27539 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GDF1P27539 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
GDF1P27539 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GDF1P27539 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.81■□□□□ 0.28
GDF1P27539 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.81■□□□□ 0.28
GDF1P27539 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GDF1P27539 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.81■□□□□ 0.28
GDF1P27539 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.81■□□□□ 0.28
GDF1P27539 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.81■□□□□ 0.28
GDF1P27539 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.81■□□□□ 0.28
GDF1P27539 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.81■□□□□ 0.28
GDF1P27539 AC009065.1-201ENST00000564055 1225 ntBASIC16.81■□□□□ 0.28
GDF1P27539 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.81■□□□□ 0.28
GDF1P27539 AL136038.4-201ENST00000603606 1261 ntBASIC16.81■□□□□ 0.28
GDF1P27539 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
GDF1P27539 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GDF1P27539 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
GDF1P27539 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GDF1P27539 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GDF1P27539 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GDF1P27539 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
GDF1P27539 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
GDF1P27539 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GDF1P27539 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GDF1P27539 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.8■□□□□ 0.28
GDF1P27539 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GDF1P27539 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GDF1P27539 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GDF1P27539 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GDF1P27539 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
GDF1P27539 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.8■□□□□ 0.28
GDF1P27539 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
GDF1P27539 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
GDF1P27539 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
GDF1P27539 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GDF1P27539 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.8■□□□□ 0.28
GDF1P27539 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.8■□□□□ 0.28
GDF1P27539 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.8■□□□□ 0.28
GDF1P27539 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
GDF1P27539 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.8■□□□□ 0.28
GDF1P27539 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.8■□□□□ 0.28
GDF1P27539 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.8■□□□□ 0.28
GDF1P27539 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
GDF1P27539 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.8■□□□□ 0.28
GDF1P27539 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.8■□□□□ 0.28
GDF1P27539 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
GDF1P27539 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
GDF1P27539 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
GDF1P27539 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC16.79■□□□□ 0.28
GDF1P27539 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC16.79■□□□□ 0.28
GDF1P27539 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
GDF1P27539 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
GDF1P27539 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
GDF1P27539 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GDF1P27539 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GDF1P27539 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GDF1P27539 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
GDF1P27539 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.79■□□□□ 0.28
GDF1P27539 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
GDF1P27539 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GDF1P27539 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GDF1P27539 AL645929.1-201ENST00000420084 975 ntBASIC16.79■□□□□ 0.28
GDF1P27539 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.79■□□□□ 0.28
GDF1P27539 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GDF1P27539 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.79■□□□□ 0.28
GDF1P27539 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.79■□□□□ 0.28
GDF1P27539 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms