Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
VARSP26640 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
VARSP26640 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
VARSP26640 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.23■□□□□ 0.51
VARSP26640 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
VARSP26640 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
VARSP26640 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
VARSP26640 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
VARSP26640 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
VARSP26640 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
VARSP26640 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
VARSP26640 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
VARSP26640 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
VARSP26640 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.23■□□□□ 0.51
VARSP26640 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.23■□□□□ 0.51
VARSP26640 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.23■□□□□ 0.51
VARSP26640 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.23■□□□□ 0.51
VARSP26640 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.23■□□□□ 0.51
VARSP26640 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
VARSP26640 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.23■□□□□ 0.51
VARSP26640 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
VARSP26640 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
VARSP26640 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
VARSP26640 AC099398.1-201ENST00000567919 2776 ntBASIC18.23■□□□□ 0.51
VARSP26640 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.23■□□□□ 0.51
VARSP26640 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.23■□□□□ 0.51
VARSP26640 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
VARSP26640 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
VARSP26640 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.22■□□□□ 0.51
VARSP26640 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VARSP26640 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
VARSP26640 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VARSP26640 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.22■□□□□ 0.51
VARSP26640 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
VARSP26640 AC097488.1-201ENST00000507834 756 ntBASIC18.22■□□□□ 0.51
VARSP26640 NAPSB-206ENST00000562112 1266 ntBASIC18.22■□□□□ 0.51
VARSP26640 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.22■□□□□ 0.51
VARSP26640 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.22■□□□□ 0.51
VARSP26640 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.22■□□□□ 0.51
VARSP26640 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.22■□□□□ 0.51
VARSP26640 AC083906.6-201ENST00000641366 219 ntBASIC18.22■□□□□ 0.51
VARSP26640 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
VARSP26640 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
VARSP26640 AC012313.1-201ENST00000593393 3059 ntBASIC18.22■□□□□ 0.51
VARSP26640 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
VARSP26640 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.22■□□□□ 0.51
VARSP26640 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
VARSP26640 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
VARSP26640 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
VARSP26640 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VARSP26640 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.22■□□□□ 0.51
VARSP26640 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
VARSP26640 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.22■□□□□ 0.51
VARSP26640 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
VARSP26640 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VARSP26640 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
VARSP26640 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.21■□□□□ 0.51
VARSP26640 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
VARSP26640 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
VARSP26640 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
VARSP26640 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.21■□□□□ 0.51
VARSP26640 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VARSP26640 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.21■□□□□ 0.51
VARSP26640 AC113347.1-201ENST00000413321 391 ntBASIC18.21■□□□□ 0.51
VARSP26640 MFAP1P1-201ENST00000442257 1255 ntBASIC18.21■□□□□ 0.51
VARSP26640 RBM17P1-201ENST00000453646 1190 ntBASIC18.21■□□□□ 0.51
VARSP26640 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.21■□□□□ 0.51
VARSP26640 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.21■□□□□ 0.51
VARSP26640 DGCR10-201ENST00000609839 495 ntBASIC18.21■□□□□ 0.51
VARSP26640 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
VARSP26640 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VARSP26640 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VARSP26640 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
VARSP26640 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VARSP26640 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.21■□□□□ 0.51
VARSP26640 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VARSP26640 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VARSP26640 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VARSP26640 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.21■□□□□ 0.51
VARSP26640 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.21■□□□□ 0.51
VARSP26640 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
VARSP26640 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.21■□□□□ 0.5
VARSP26640 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VARSP26640 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
VARSP26640 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
VARSP26640 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VARSP26640 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.2■□□□□ 0.5
VARSP26640 AC096733.2-201ENST00000609937 1394 ntBASIC18.2■□□□□ 0.5
VARSP26640 LINC01568-207ENST00000641790 1380 ntBASIC18.2■□□□□ 0.5
VARSP26640 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VARSP26640 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VARSP26640 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.2■□□□□ 0.5
VARSP26640 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.2■□□□□ 0.5
VARSP26640 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VARSP26640 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VARSP26640 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.2■□□□□ 0.5
VARSP26640 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VARSP26640 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
VARSP26640 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VARSP26640 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms