Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATF1P18846 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATF1P18846 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.31■□□□□ 0.2
ATF1P18846 AC009053.2-201ENST00000563701 2365 ntBASIC16.3■□□□□ 0.2
ATF1P18846 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
ATF1P18846 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
ATF1P18846 KRT8P41-201ENST00000533985 1514 ntBASIC16.3■□□□□ 0.2
ATF1P18846 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATF1P18846 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATF1P18846 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATF1P18846 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATF1P18846 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATF1P18846 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATF1P18846 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.3■□□□□ 0.2
ATF1P18846 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATF1P18846 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATF1P18846 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATF1P18846 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATF1P18846 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATF1P18846 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
ATF1P18846 KRASP1-201ENST00000407852 552 ntBASIC16.3■□□□□ 0.2
ATF1P18846 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC16.3■□□□□ 0.2
ATF1P18846 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATF1P18846 AC233263.1-201ENST00000578059 224 ntBASIC16.3■□□□□ 0.2
ATF1P18846 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC16.3■□□□□ 0.2
ATF1P18846 AL023875.1-201ENST00000640777 796 ntBASIC16.3■□□□□ 0.2
ATF1P18846 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
ATF1P18846 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.3■□□□□ 0.2
ATF1P18846 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATF1P18846 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATF1P18846 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.3■□□□□ 0.2
ATF1P18846 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATF1P18846 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATF1P18846 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATF1P18846 MTMR9LP-203ENST00000426597 1545 ntBASIC16.29■□□□□ 0.2
ATF1P18846 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATF1P18846 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
ATF1P18846 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATF1P18846 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
ATF1P18846 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATF1P18846 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
ATF1P18846 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
ATF1P18846 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
ATF1P18846 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATF1P18846 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ATF1P18846 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.29■□□□□ 0.2
ATF1P18846 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
ATF1P18846 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATF1P18846 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATF1P18846 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ATF1P18846 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
ATF1P18846 KRT16P5-201ENST00000455284 522 ntBASIC16.29■□□□□ 0.2
ATF1P18846 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ATF1P18846 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.29■□□□□ 0.2
ATF1P18846 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC16.29■□□□□ 0.2
ATF1P18846 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
ATF1P18846 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC16.29■□□□□ 0.2
ATF1P18846 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATF1P18846 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATF1P18846 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
ATF1P18846 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.29■□□□□ 0.2
ATF1P18846 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.29■□□□□ 0.2
ATF1P18846 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATF1P18846 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
ATF1P18846 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATF1P18846 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.29■□□□□ 0.2
ATF1P18846 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATF1P18846 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.29■□□□□ 0.2
ATF1P18846 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATF1P18846 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.29■□□□□ 0.2
ATF1P18846 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.29■□□□□ 0.2
ATF1P18846 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ATF1P18846 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.28■□□□□ 0.2
ATF1P18846 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
ATF1P18846 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.28■□□□□ 0.2
ATF1P18846 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
ATF1P18846 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
ATF1P18846 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.28■□□□□ 0.2
ATF1P18846 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATF1P18846 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATF1P18846 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATF1P18846 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATF1P18846 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC16.28■□□□□ 0.2
ATF1P18846 AC239809.2-201ENST00000415381 517 ntBASIC16.28■□□□□ 0.2
ATF1P18846 SLC25A6P5-201ENST00000435663 894 ntBASIC16.28■□□□□ 0.2
ATF1P18846 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.28■□□□□ 0.2
ATF1P18846 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC16.28■□□□□ 0.2
ATF1P18846 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATF1P18846 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATF1P18846 AC093677.2-201ENST00000600169 1863 ntBASIC16.28■□□□□ 0.2
ATF1P18846 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATF1P18846 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
ATF1P18846 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATF1P18846 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.28■□□□□ 0.2
ATF1P18846 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.28■□□□□ 0.2
ATF1P18846 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ATF1P18846 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATF1P18846 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.28■□□□□ 0.2
ATF1P18846 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ATF1P18846 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms