Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.08■□□□□ 0.64
ERCC2P18074 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
ERCC2P18074 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.08■□□□□ 0.64
ERCC2P18074 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.08■□□□□ 0.64
ERCC2P18074 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.08■□□□□ 0.64
ERCC2P18074 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
ERCC2P18074 AC005363.2-201ENST00000618631 242 ntBASIC19.08■□□□□ 0.64
ERCC2P18074 AL138966.2-201ENST00000621997 464 ntBASIC19.08■□□□□ 0.64
ERCC2P18074 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
ERCC2P18074 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
ERCC2P18074 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ERCC2P18074 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ERCC2P18074 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.08■□□□□ 0.64
ERCC2P18074 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
ERCC2P18074 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
ERCC2P18074 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ERCC2P18074 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ERCC2P18074 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.08■□□□□ 0.64
ERCC2P18074 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ERCC2P18074 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
ERCC2P18074 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.08■□□□□ 0.64
ERCC2P18074 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ERCC2P18074 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ERCC2P18074 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ERCC2P18074 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.07■□□□□ 0.64
ERCC2P18074 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.07■□□□□ 0.64
ERCC2P18074 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.07■□□□□ 0.64
ERCC2P18074 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.07■□□□□ 0.64
ERCC2P18074 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ERCC2P18074 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ERCC2P18074 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
ERCC2P18074 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ERCC2P18074 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ERCC2P18074 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ERCC2P18074 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ERCC2P18074 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ERCC2P18074 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ERCC2P18074 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ERCC2P18074 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ERCC2P18074 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ERCC2P18074 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ERCC2P18074 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ERCC2P18074 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.07■□□□□ 0.64
ERCC2P18074 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.07■□□□□ 0.64
ERCC2P18074 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
ERCC2P18074 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.07■□□□□ 0.64
ERCC2P18074 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.07■□□□□ 0.64
ERCC2P18074 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.07■□□□□ 0.64
ERCC2P18074 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ERCC2P18074 AC141257.4-201ENST00000634557 245 ntBASIC19.07■□□□□ 0.64
ERCC2P18074 AC136944.6-201ENST00000634818 245 ntBASIC19.07■□□□□ 0.64
ERCC2P18074 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
ERCC2P18074 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
ERCC2P18074 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ERCC2P18074 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ERCC2P18074 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
ERCC2P18074 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ERCC2P18074 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
ERCC2P18074 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
ERCC2P18074 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
ERCC2P18074 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ERCC2P18074 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.06■□□□□ 0.64
ERCC2P18074 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ERCC2P18074 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
ERCC2P18074 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ERCC2P18074 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ERCC2P18074 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
ERCC2P18074 AC113347.1-201ENST00000413321 391 ntBASIC19.06■□□□□ 0.64
ERCC2P18074 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.06■□□□□ 0.64
ERCC2P18074 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.06■□□□□ 0.64
ERCC2P18074 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.06■□□□□ 0.64
ERCC2P18074 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.06■□□□□ 0.64
ERCC2P18074 NEK4P2-201ENST00000580004 1012 ntBASIC19.06■□□□□ 0.64
ERCC2P18074 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.06■□□□□ 0.64
ERCC2P18074 LINC01023-201ENST00000606054 436 ntBASIC19.06■□□□□ 0.64
ERCC2P18074 NEFHP1-201ENST00000412845 2629 ntBASIC19.06■□□□□ 0.64
ERCC2P18074 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
ERCC2P18074 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ERCC2P18074 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ERCC2P18074 AC099343.3-201ENST00000605834 2503 ntBASIC19.06■□□□□ 0.64
ERCC2P18074 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.06■□□□□ 0.64
ERCC2P18074 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.06■□□□□ 0.64
ERCC2P18074 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.06■□□□□ 0.64
ERCC2P18074 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ERCC2P18074 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ERCC2P18074 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ERCC2P18074 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ERCC2P18074 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.05■□□□□ 0.64
ERCC2P18074 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
ERCC2P18074 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.05■□□□□ 0.64
ERCC2P18074 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.05■□□□□ 0.64
ERCC2P18074 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
ERCC2P18074 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.05■□□□□ 0.64
ERCC2P18074 LIN28AP1-201ENST00000429574 405 ntBASIC19.05■□□□□ 0.64
ERCC2P18074 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.05■□□□□ 0.64
ERCC2P18074 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.05■□□□□ 0.64
ERCC2P18074 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.05■□□□□ 0.64
ERCC2P18074 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.05■□□□□ 0.64
ERCC2P18074 AC104390.1-201ENST00000555663 520 ntBASIC19.05■□□□□ 0.64
ERCC2P18074 AC024243.1-201ENST00000609234 778 ntBASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms