Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.46■□□□□ 0.71
PDGFRAP16234 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.46■□□□□ 0.71
PDGFRAP16234 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDGFRAP16234 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.46■□□□□ 0.71
PDGFRAP16234 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDGFRAP16234 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDGFRAP16234 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.46■□□□□ 0.71
PDGFRAP16234 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
PDGFRAP16234 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PDGFRAP16234 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDGFRAP16234 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PDGFRAP16234 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDGFRAP16234 MYLKP1-201ENST00000509077 1580 ntBASIC19.45■□□□□ 0.7
PDGFRAP16234 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
PDGFRAP16234 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
PDGFRAP16234 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
PDGFRAP16234 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.45■□□□□ 0.7
PDGFRAP16234 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.45■□□□□ 0.7
PDGFRAP16234 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
PDGFRAP16234 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.45■□□□□ 0.7
PDGFRAP16234 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.45■□□□□ 0.7
PDGFRAP16234 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDGFRAP16234 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
PDGFRAP16234 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PDGFRAP16234 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
PDGFRAP16234 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.45■□□□□ 0.7
PDGFRAP16234 ATP5G1P1-201ENST00000448724 379 ntBASIC19.45■□□□□ 0.7
PDGFRAP16234 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.45■□□□□ 0.7
PDGFRAP16234 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.45■□□□□ 0.7
PDGFRAP16234 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.45■□□□□ 0.7
PDGFRAP16234 AC092865.7-201ENST00000641832 219 ntBASIC19.45■□□□□ 0.7
PDGFRAP16234 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDGFRAP16234 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDGFRAP16234 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDGFRAP16234 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
PDGFRAP16234 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDGFRAP16234 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDGFRAP16234 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PDGFRAP16234 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
PDGFRAP16234 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PDGFRAP16234 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDGFRAP16234 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDGFRAP16234 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDGFRAP16234 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDGFRAP16234 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
PDGFRAP16234 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.45■□□□□ 0.7
PDGFRAP16234 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
PDGFRAP16234 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PDGFRAP16234 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.44■□□□□ 0.7
PDGFRAP16234 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDGFRAP16234 AC073508.3-201ENST00000619697 1419 ntBASIC19.44■□□□□ 0.7
PDGFRAP16234 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.44■□□□□ 0.7
PDGFRAP16234 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
PDGFRAP16234 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDGFRAP16234 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PDGFRAP16234 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PDGFRAP16234 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDGFRAP16234 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.44■□□□□ 0.7
PDGFRAP16234 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.44■□□□□ 0.7
PDGFRAP16234 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.44■□□□□ 0.7
PDGFRAP16234 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.44■□□□□ 0.7
PDGFRAP16234 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.44■□□□□ 0.7
PDGFRAP16234 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
PDGFRAP16234 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PDGFRAP16234 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDGFRAP16234 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDGFRAP16234 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDGFRAP16234 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
PDGFRAP16234 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDGFRAP16234 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.44■□□□□ 0.7
PDGFRAP16234 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.44■□□□□ 0.7
PDGFRAP16234 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDGFRAP16234 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.43■□□□□ 0.7
PDGFRAP16234 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDGFRAP16234 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDGFRAP16234 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDGFRAP16234 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PDGFRAP16234 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
PDGFRAP16234 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDGFRAP16234 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PDGFRAP16234 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDGFRAP16234 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PDGFRAP16234 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDGFRAP16234 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDGFRAP16234 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PDGFRAP16234 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDGFRAP16234 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PDGFRAP16234 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDGFRAP16234 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDGFRAP16234 AP000593.1-201ENST00000393668 712 ntBASIC19.43■□□□□ 0.7
PDGFRAP16234 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.43■□□□□ 0.7
PDGFRAP16234 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PDGFRAP16234 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.43■□□□□ 0.7
PDGFRAP16234 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.43■□□□□ 0.7
PDGFRAP16234 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.43■□□□□ 0.7
PDGFRAP16234 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PDGFRAP16234 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.43■□□□□ 0.7
PDGFRAP16234 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.43■□□□□ 0.7
PDGFRAP16234 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDGFRAP16234 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms