Protein–RNA interactions for Protein: P12270

TPR, Nucleoprotein TPR, humanhuman

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRP12270 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TPRP12270 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TPRP12270 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TPRP12270 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
TPRP12270 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TPRP12270 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.36■□□□□ 0.37
TPRP12270 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.36■□□□□ 0.37
TPRP12270 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
TPRP12270 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TPRP12270 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.36■□□□□ 0.37
TPRP12270 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.36■□□□□ 0.37
TPRP12270 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
TPRP12270 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.35■□□□□ 0.37
TPRP12270 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TPRP12270 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC17.35■□□□□ 0.37
TPRP12270 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TPRP12270 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TPRP12270 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TPRP12270 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.35■□□□□ 0.37
TPRP12270 IGHV3-71-201ENST00000523324 359 ntBASIC17.35■□□□□ 0.37
TPRP12270 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.35■□□□□ 0.37
TPRP12270 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.35■□□□□ 0.37
TPRP12270 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TPRP12270 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.35■□□□□ 0.37
TPRP12270 AC073592.5-201ENST00000624854 528 ntBASIC17.35■□□□□ 0.37
TPRP12270 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TPRP12270 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TPRP12270 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TPRP12270 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
TPRP12270 AL356309.3-201ENST00000624132 1934 ntBASIC17.35■□□□□ 0.37
TPRP12270 FEM1AP1-201ENST00000431297 1995 ntBASIC17.35■□□□□ 0.37
TPRP12270 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.35■□□□□ 0.37
TPRP12270 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.35■□□□□ 0.37
TPRP12270 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.35■□□□□ 0.37
TPRP12270 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TPRP12270 AC010240.3-201ENST00000607688 395 ntBASIC17.35■□□□□ 0.37
TPRP12270 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.35■□□□□ 0.37
TPRP12270 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TPRP12270 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC17.34■□□□□ 0.37
TPRP12270 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.34■□□□□ 0.37
TPRP12270 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TPRP12270 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.34■□□□□ 0.37
TPRP12270 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TPRP12270 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TPRP12270 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.34■□□□□ 0.37
TPRP12270 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC17.34■□□□□ 0.37
TPRP12270 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TPRP12270 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TPRP12270 MCCD1P1-208ENST00000445732 328 ntBASIC17.34■□□□□ 0.37
TPRP12270 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.34■□□□□ 0.37
TPRP12270 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.34■□□□□ 0.37
TPRP12270 CECR7-204ENST00000609932 568 ntTSL 2 BASIC17.34■□□□□ 0.37
TPRP12270 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TPRP12270 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TPRP12270 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.34■□□□□ 0.37
TPRP12270 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TPRP12270 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TPRP12270 AC079834.2-201ENST00000609776 1949 ntBASIC17.34■□□□□ 0.37
TPRP12270 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TPRP12270 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC17.34■□□□□ 0.37
TPRP12270 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TPRP12270 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC17.34■□□□□ 0.37
TPRP12270 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.33■□□□□ 0.37
TPRP12270 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.33■□□□□ 0.37
TPRP12270 DUT-210ENST00000559935 569 ntTSL 3 BASIC17.33■□□□□ 0.37
TPRP12270 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC17.33■□□□□ 0.37
TPRP12270 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TPRP12270 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TPRP12270 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TPRP12270 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.33■□□□□ 0.37
TPRP12270 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TPRP12270 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC17.33■□□□□ 0.37
TPRP12270 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
TPRP12270 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
TPRP12270 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TPRP12270 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
TPRP12270 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
TPRP12270 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.33■□□□□ 0.36
TPRP12270 GALT-202ENST00000450095 1280 ntTSL 2 BASIC17.33■□□□□ 0.36
TPRP12270 PARP8-218ENST00000513738 596 ntTSL 4 BASIC17.33■□□□□ 0.36
TPRP12270 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
TPRP12270 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.33■□□□□ 0.36
TPRP12270 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TPRP12270 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TPRP12270 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TPRP12270 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC17.33■□□□□ 0.36
TPRP12270 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC17.33■□□□□ 0.36
TPRP12270 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TPRP12270 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TPRP12270 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TPRP12270 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TPRP12270 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.32■□□□□ 0.36
TPRP12270 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TPRP12270 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TPRP12270 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TPRP12270 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.32■□□□□ 0.36
TPRP12270 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TPRP12270 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.32■□□□□ 0.36
TPRP12270 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TPRP12270 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms