Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TOP1P11387 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC21.79■■□□□ 1.08
TOP1P11387 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TOP1P11387 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TOP1P11387 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TOP1P11387 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC21.78■■□□□ 1.08
TOP1P11387 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
TOP1P11387 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
TOP1P11387 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TOP1P11387 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TOP1P11387 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
TOP1P11387 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
TOP1P11387 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC21.78■■□□□ 1.08
TOP1P11387 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC21.78■■□□□ 1.08
TOP1P11387 AC112907.2-201ENST00000448639 330 ntBASIC21.78■■□□□ 1.08
TOP1P11387 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TOP1P11387 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TOP1P11387 AC104390.1-201ENST00000555663 520 ntBASIC21.78■■□□□ 1.08
TOP1P11387 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC21.78■■□□□ 1.08
TOP1P11387 HYMAI.1-201ENST00000620949 238 ntBASIC21.78■■□□□ 1.08
TOP1P11387 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
TOP1P11387 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC21.78■■□□□ 1.08
TOP1P11387 Z98044.1-201ENST00000632503 1764 ntBASIC21.78■■□□□ 1.08
TOP1P11387 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
TOP1P11387 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TOP1P11387 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC21.78■■□□□ 1.08
TOP1P11387 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC21.78■■□□□ 1.08
TOP1P11387 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC21.78■■□□□ 1.08
TOP1P11387 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TOP1P11387 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TOP1P11387 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
TOP1P11387 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC21.78■■□□□ 1.08
TOP1P11387 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
TOP1P11387 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC21.78■■□□□ 1.08
TOP1P11387 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TOP1P11387 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TOP1P11387 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC21.77■■□□□ 1.08
TOP1P11387 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TOP1P11387 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC21.77■■□□□ 1.08
TOP1P11387 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC21.77■■□□□ 1.08
TOP1P11387 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TOP1P11387 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TOP1P11387 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TOP1P11387 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
TOP1P11387 ISCU-203ENST00000431221 799 ntTSL 2 BASIC21.77■■□□□ 1.08
TOP1P11387 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC21.77■■□□□ 1.08
TOP1P11387 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC21.77■■□□□ 1.08
TOP1P11387 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
TOP1P11387 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC21.77■■□□□ 1.08
TOP1P11387 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TOP1P11387 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC21.77■■□□□ 1.08
TOP1P11387 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TOP1P11387 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC21.77■■□□□ 1.07
TOP1P11387 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
TOP1P11387 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
TOP1P11387 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC21.77■■□□□ 1.07
TOP1P11387 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
TOP1P11387 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
TOP1P11387 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
TOP1P11387 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC21.76■■□□□ 1.07
TOP1P11387 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TOP1P11387 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TOP1P11387 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC21.76■■□□□ 1.07
TOP1P11387 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
TOP1P11387 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC21.76■■□□□ 1.07
TOP1P11387 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC21.76■■□□□ 1.07
TOP1P11387 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
TOP1P11387 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC21.76■■□□□ 1.07
TOP1P11387 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
TOP1P11387 MIR3917-201ENST00000580971 93 ntBASIC21.76■■□□□ 1.07
TOP1P11387 AL121956.5-201ENST00000625261 221 ntBASIC21.76■■□□□ 1.07
TOP1P11387 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TOP1P11387 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TOP1P11387 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
TOP1P11387 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
TOP1P11387 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC21.76■■□□□ 1.07
TOP1P11387 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC21.76■■□□□ 1.07
TOP1P11387 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC21.76■■□□□ 1.07
TOP1P11387 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
TOP1P11387 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC21.75■■□□□ 1.07
TOP1P11387 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TOP1P11387 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
TOP1P11387 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC21.75■■□□□ 1.07
TOP1P11387 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TOP1P11387 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC21.75■■□□□ 1.07
TOP1P11387 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
TOP1P11387 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TOP1P11387 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC21.75■■□□□ 1.07
TOP1P11387 AL157888.1-201ENST00000631930 593 ntBASIC21.75■■□□□ 1.07
TOP1P11387 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TOP1P11387 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TOP1P11387 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TOP1P11387 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
TOP1P11387 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC21.75■■□□□ 1.07
TOP1P11387 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TOP1P11387 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TOP1P11387 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
TOP1P11387 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
TOP1P11387 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TOP1P11387 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms