Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.81■□□□□ 0.6
HLA-DQB2P05538 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.81■□□□□ 0.6
HLA-DQB2P05538 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.81■□□□□ 0.6
HLA-DQB2P05538 LINC01023-201ENST00000606054 436 ntBASIC18.81■□□□□ 0.6
HLA-DQB2P05538 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DQB2P05538 AC005363.2-201ENST00000618631 242 ntBASIC18.81■□□□□ 0.6
HLA-DQB2P05538 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DQB2P05538 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.81■□□□□ 0.6
HLA-DQB2P05538 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DQB2P05538 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.81■□□□□ 0.6
HLA-DQB2P05538 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DQB2P05538 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DQB2P05538 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DQB2P05538 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
HLA-DQB2P05538 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.81■□□□□ 0.6
HLA-DQB2P05538 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
HLA-DQB2P05538 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DQB2P05538 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DQB2P05538 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DQB2P05538 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DQB2P05538 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
HLA-DQB2P05538 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DQB2P05538 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DQB2P05538 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DQB2P05538 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DQB2P05538 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.8■□□□□ 0.6
HLA-DQB2P05538 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DQB2P05538 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
HLA-DQB2P05538 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DQB2P05538 TERF1P1-201ENST00000311003 1181 ntBASIC18.8■□□□□ 0.6
HLA-DQB2P05538 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.8■□□□□ 0.6
HLA-DQB2P05538 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.8■□□□□ 0.6
HLA-DQB2P05538 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.8■□□□□ 0.6
HLA-DQB2P05538 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
HLA-DQB2P05538 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.8■□□□□ 0.6
HLA-DQB2P05538 NEK4P2-201ENST00000580004 1012 ntBASIC18.8■□□□□ 0.6
HLA-DQB2P05538 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DQB2P05538 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DQB2P05538 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.8■□□□□ 0.6
HLA-DQB2P05538 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.8■□□□□ 0.6
HLA-DQB2P05538 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DQB2P05538 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.8■□□□□ 0.6
HLA-DQB2P05538 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.8■□□□□ 0.6
HLA-DQB2P05538 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DQB2P05538 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
HLA-DQB2P05538 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
HLA-DQB2P05538 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.8■□□□□ 0.6
HLA-DQB2P05538 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
HLA-DQB2P05538 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.8■□□□□ 0.6
HLA-DQB2P05538 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.79■□□□□ 0.6
HLA-DQB2P05538 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DQB2P05538 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.79■□□□□ 0.6
HLA-DQB2P05538 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.79■□□□□ 0.6
HLA-DQB2P05538 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.79■□□□□ 0.6
HLA-DQB2P05538 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DQB2P05538 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DQB2P05538 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.79■□□□□ 0.6
HLA-DQB2P05538 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.79■□□□□ 0.6
HLA-DQB2P05538 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DQB2P05538 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DQB2P05538 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DQB2P05538 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
HLA-DQB2P05538 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DQB2P05538 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DQB2P05538 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.79■□□□□ 0.6
HLA-DQB2P05538 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DQB2P05538 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.79■□□□□ 0.6
HLA-DQB2P05538 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DQB2P05538 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.79■□□□□ 0.6
HLA-DQB2P05538 SEC1P-202ENST00000473944 940 ntBASIC18.79■□□□□ 0.6
HLA-DQB2P05538 AC104390.1-201ENST00000555663 520 ntBASIC18.79■□□□□ 0.6
HLA-DQB2P05538 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.79■□□□□ 0.6
HLA-DQB2P05538 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DQB2P05538 AC024243.1-201ENST00000609234 778 ntBASIC18.79■□□□□ 0.6
HLA-DQB2P05538 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DQB2P05538 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
HLA-DQB2P05538 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.79■□□□□ 0.6
HLA-DQB2P05538 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DQB2P05538 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
HLA-DQB2P05538 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DQB2P05538 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DQB2P05538 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.78■□□□□ 0.6
HLA-DQB2P05538 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DQB2P05538 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DQB2P05538 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.78■□□□□ 0.6
HLA-DQB2P05538 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.78■□□□□ 0.6
HLA-DQB2P05538 AC073508.3-201ENST00000619697 1419 ntBASIC18.78■□□□□ 0.6
HLA-DQB2P05538 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
HLA-DQB2P05538 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DQB2P05538 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.78■□□□□ 0.6
HLA-DQB2P05538 AC005521.1-201ENST00000393351 872 ntBASIC18.78■□□□□ 0.6
HLA-DQB2P05538 LIN28AP1-201ENST00000429574 405 ntBASIC18.78■□□□□ 0.6
HLA-DQB2P05538 AL137013.1-201ENST00000432946 1228 ntBASIC18.78■□□□□ 0.6
HLA-DQB2P05538 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
HLA-DQB2P05538 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DQB2P05538 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DQB2P05538 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.78■□□□□ 0.6
HLA-DQB2P05538 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.78■□□□□ 0.6
HLA-DQB2P05538 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.78■□□□□ 0.6
HLA-DQB2P05538 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms