Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
P04436 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.95■□□□□ 0.3
P04436 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
P04436 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
P04436 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
P04436 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
P04436 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
P04436 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
P04436 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
P04436 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC16.95■□□□□ 0.3
P04436 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
P04436 AC005332.1-201ENST00000577698 1310 ntBASIC16.95■□□□□ 0.3
P04436 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.94■□□□□ 0.3
P04436 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.94■□□□□ 0.3
P04436 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC16.94■□□□□ 0.3
P04436 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
P04436 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.94■□□□□ 0.3
P04436 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
P04436 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
P04436 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
P04436 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
P04436 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
P04436 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
P04436 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
P04436 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
P04436 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
P04436 UPK3BP1-201ENST00000428678 509 ntBASIC16.94■□□□□ 0.3
P04436 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.94■□□□□ 0.3
P04436 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.94■□□□□ 0.3
P04436 AL136038.4-201ENST00000603606 1261 ntBASIC16.94■□□□□ 0.3
P04436 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.94■□□□□ 0.3
P04436 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.94■□□□□ 0.3
P04436 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
P04436 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.94■□□□□ 0.3
P04436 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
P04436 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.94■□□□□ 0.3
P04436 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC16.94■□□□□ 0.3
P04436 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
P04436 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.93■□□□□ 0.3
P04436 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.93■□□□□ 0.3
P04436 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
P04436 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
P04436 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
P04436 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
P04436 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
P04436 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
P04436 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
P04436 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.93■□□□□ 0.3
P04436 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
P04436 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.93■□□□□ 0.3
P04436 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
P04436 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC16.93■□□□□ 0.3
P04436 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
P04436 AC020763.4-201ENST00000623414 4170 ntBASIC16.93■□□□□ 0.3
P04436 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
P04436 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
P04436 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
P04436 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
P04436 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
P04436 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
P04436 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.93■□□□□ 0.3
P04436 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
P04436 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
P04436 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.93■□□□□ 0.3
P04436 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
P04436 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.93■□□□□ 0.3
P04436 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.93■□□□□ 0.3
P04436 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
P04436 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.93■□□□□ 0.3
P04436 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.93■□□□□ 0.3
P04436 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.93■□□□□ 0.3
P04436 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.93■□□□□ 0.3
P04436 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.93■□□□□ 0.3
P04436 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.93■□□□□ 0.3
P04436 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
P04436 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
P04436 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
P04436 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.93■□□□□ 0.3
P04436 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
P04436 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC16.93■□□□□ 0.3
P04436 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.93■□□□□ 0.3
P04436 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
P04436 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC16.93■□□□□ 0.3
P04436 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
P04436 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
P04436 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
P04436 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
P04436 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
P04436 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
P04436 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
P04436 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
P04436 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.92■□□□□ 0.3
P04436 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.92■□□□□ 0.3
P04436 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
P04436 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
P04436 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
P04436 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
P04436 AL645929.1-201ENST00000420084 975 ntBASIC16.92■□□□□ 0.3
P04436 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.92■□□□□ 0.3
P04436 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms