Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CD74P04233 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CD74P04233 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CD74P04233 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CD74P04233 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CD74P04233 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CD74P04233 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
CD74P04233 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CD74P04233 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CD74P04233 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CD74P04233 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.59■□□□□ 0.09
CD74P04233 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CD74P04233 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.59■□□□□ 0.09
CD74P04233 AD000864.1-201ENST00000624076 2295 ntBASIC15.59■□□□□ 0.09
CD74P04233 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CD74P04233 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CD74P04233 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
CD74P04233 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CD74P04233 AL096828.2-201ENST00000567259 1965 ntBASIC15.59■□□□□ 0.09
CD74P04233 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC15.59■□□□□ 0.09
CD74P04233 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CD74P04233 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CD74P04233 DUSP5P2-201ENST00000426873 1033 ntBASIC15.59■□□□□ 0.09
CD74P04233 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC15.59■□□□□ 0.09
CD74P04233 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC15.59■□□□□ 0.09
CD74P04233 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC15.59■□□□□ 0.09
CD74P04233 AF201337.1-201ENST00000520239 748 ntBASIC15.59■□□□□ 0.09
CD74P04233 AC105036.2-201ENST00000569468 176 ntBASIC15.59■□□□□ 0.09
CD74P04233 MIR6821-201ENST00000617625 74 ntBASIC15.59■□□□□ 0.09
CD74P04233 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CD74P04233 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CD74P04233 STK4-201ENST00000372801 2038 ntTSL 2 BASIC15.59■□□□□ 0.09
CD74P04233 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CD74P04233 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
CD74P04233 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CD74P04233 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.59■□□□□ 0.09
CD74P04233 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CD74P04233 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CD74P04233 AC084018.2-201ENST00000613093 2607 ntBASIC15.59■□□□□ 0.09
CD74P04233 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
CD74P04233 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
CD74P04233 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CD74P04233 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.59■□□□□ 0.09
CD74P04233 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CD74P04233 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CD74P04233 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15.58■□□□□ 0.09
CD74P04233 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CD74P04233 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CD74P04233 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.58■□□□□ 0.09
CD74P04233 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CD74P04233 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CD74P04233 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CD74P04233 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CD74P04233 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC15.58■□□□□ 0.09
CD74P04233 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CD74P04233 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CD74P04233 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CD74P04233 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CD74P04233 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CD74P04233 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
CD74P04233 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.58■□□□□ 0.08
CD74P04233 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CD74P04233 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.08
CD74P04233 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CD74P04233 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC15.58■□□□□ 0.08
CD74P04233 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC15.58■□□□□ 0.08
CD74P04233 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC15.58■□□□□ 0.08
CD74P04233 GLRB-205ENST00000512619 728 ntTSL 3 BASIC15.58■□□□□ 0.08
CD74P04233 KRT18P41-201ENST00000518924 1277 ntBASIC15.58■□□□□ 0.08
CD74P04233 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CD74P04233 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC15.58■□□□□ 0.08
CD74P04233 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC15.58■□□□□ 0.08
CD74P04233 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CD74P04233 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC15.58■□□□□ 0.08
CD74P04233 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CD74P04233 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CD74P04233 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CD74P04233 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CD74P04233 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CD74P04233 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CD74P04233 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CD74P04233 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.58■□□□□ 0.08
CD74P04233 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CD74P04233 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC15.58■□□□□ 0.08
CD74P04233 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CD74P04233 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CD74P04233 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CD74P04233 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CD74P04233 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CD74P04233 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC15.57■□□□□ 0.08
CD74P04233 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CD74P04233 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD74P04233 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CD74P04233 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD74P04233 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC15.57■□□□□ 0.08
CD74P04233 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD74P04233 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CD74P04233 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD74P04233 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC15.57■□□□□ 0.08
CD74P04233 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms