Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDGFBP01127 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.6■□□□□ 0.57
PDGFBP01127 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
PDGFBP01127 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.6■□□□□ 0.57
PDGFBP01127 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.6■□□□□ 0.57
PDGFBP01127 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
PDGFBP01127 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDGFBP01127 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDGFBP01127 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDGFBP01127 WDR53-203ENST00000429115 683 ntTSL 2 BASIC18.6■□□□□ 0.57
PDGFBP01127 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC18.6■□□□□ 0.57
PDGFBP01127 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PDGFBP01127 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.6■□□□□ 0.57
PDGFBP01127 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PDGFBP01127 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
PDGFBP01127 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC18.6■□□□□ 0.57
PDGFBP01127 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.6■□□□□ 0.57
PDGFBP01127 AC008735.5-201ENST00000623544 497 ntBASIC18.6■□□□□ 0.57
PDGFBP01127 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PDGFBP01127 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PDGFBP01127 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PDGFBP01127 INTS4P1-201ENST00000438455 1935 ntBASIC18.6■□□□□ 0.57
PDGFBP01127 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDGFBP01127 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDGFBP01127 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
PDGFBP01127 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDGFBP01127 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
PDGFBP01127 KRT8P32-201ENST00000512863 1461 ntBASIC18.59■□□□□ 0.57
PDGFBP01127 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDGFBP01127 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PDGFBP01127 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDGFBP01127 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
PDGFBP01127 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.59■□□□□ 0.57
PDGFBP01127 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.59■□□□□ 0.57
PDGFBP01127 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDGFBP01127 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDGFBP01127 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.59■□□□□ 0.57
PDGFBP01127 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.59■□□□□ 0.57
PDGFBP01127 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18.59■□□□□ 0.57
PDGFBP01127 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.59■□□□□ 0.57
PDGFBP01127 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.59■□□□□ 0.57
PDGFBP01127 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.59■□□□□ 0.57
PDGFBP01127 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.59■□□□□ 0.57
PDGFBP01127 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.59■□□□□ 0.57
PDGFBP01127 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.59■□□□□ 0.57
PDGFBP01127 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.59■□□□□ 0.57
PDGFBP01127 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PDGFBP01127 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDGFBP01127 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.59■□□□□ 0.57
PDGFBP01127 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.58■□□□□ 0.57
PDGFBP01127 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.58■□□□□ 0.57
PDGFBP01127 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
PDGFBP01127 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
PDGFBP01127 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.58■□□□□ 0.57
PDGFBP01127 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PDGFBP01127 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.58■□□□□ 0.56
PDGFBP01127 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PDGFBP01127 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC18.58■□□□□ 0.56
PDGFBP01127 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.58■□□□□ 0.56
PDGFBP01127 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.58■□□□□ 0.56
PDGFBP01127 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.58■□□□□ 0.56
PDGFBP01127 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.58■□□□□ 0.56
PDGFBP01127 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.58■□□□□ 0.56
PDGFBP01127 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18.58■□□□□ 0.56
PDGFBP01127 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PDGFBP01127 MTDHP5-201ENST00000598980 586 ntBASIC18.58■□□□□ 0.56
PDGFBP01127 AC239800.4-201ENST00000603712 296 ntBASIC18.58■□□□□ 0.56
PDGFBP01127 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PDGFBP01127 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.58■□□□□ 0.56
PDGFBP01127 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PDGFBP01127 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
PDGFBP01127 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDGFBP01127 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PDGFBP01127 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.57■□□□□ 0.56
PDGFBP01127 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PDGFBP01127 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDGFBP01127 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PDGFBP01127 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PDGFBP01127 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.57■□□□□ 0.56
PDGFBP01127 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC18.57■□□□□ 0.56
PDGFBP01127 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.57■□□□□ 0.56
PDGFBP01127 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC18.57■□□□□ 0.56
PDGFBP01127 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
PDGFBP01127 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC18.57■□□□□ 0.56
PDGFBP01127 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.57■□□□□ 0.56
PDGFBP01127 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PDGFBP01127 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDGFBP01127 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.57■□□□□ 0.56
PDGFBP01127 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PDGFBP01127 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.57■□□□□ 0.56
PDGFBP01127 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.57■□□□□ 0.56
PDGFBP01127 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC18.57■□□□□ 0.56
PDGFBP01127 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC18.57■□□□□ 0.56
PDGFBP01127 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.57■□□□□ 0.56
PDGFBP01127 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PDGFBP01127 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.57■□□□□ 0.56
PDGFBP01127 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PDGFBP01127 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PDGFBP01127 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDGFBP01127 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms