Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
VAPBO95292 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VAPBO95292 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VAPBO95292 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VAPBO95292 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
VAPBO95292 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
VAPBO95292 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.66■□□□□ 0.58
VAPBO95292 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VAPBO95292 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
VAPBO95292 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VAPBO95292 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VAPBO95292 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VAPBO95292 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.66■□□□□ 0.58
VAPBO95292 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.66■□□□□ 0.58
VAPBO95292 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.66■□□□□ 0.58
VAPBO95292 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.66■□□□□ 0.58
VAPBO95292 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VAPBO95292 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VAPBO95292 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VAPBO95292 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VAPBO95292 AC018470.1-201ENST00000624790 3129 ntBASIC18.66■□□□□ 0.58
VAPBO95292 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.66■□□□□ 0.58
VAPBO95292 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.66■□□□□ 0.58
VAPBO95292 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
VAPBO95292 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VAPBO95292 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VAPBO95292 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.65■□□□□ 0.58
VAPBO95292 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.65■□□□□ 0.58
VAPBO95292 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.65■□□□□ 0.58
VAPBO95292 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.65■□□□□ 0.58
VAPBO95292 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
VAPBO95292 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
VAPBO95292 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VAPBO95292 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VAPBO95292 MCCD1P1-208ENST00000445732 328 ntBASIC18.65■□□□□ 0.58
VAPBO95292 RBM17P1-201ENST00000453646 1190 ntBASIC18.65■□□□□ 0.58
VAPBO95292 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.65■□□□□ 0.58
VAPBO95292 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.65■□□□□ 0.58
VAPBO95292 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VAPBO95292 AP005242.2-201ENST00000580065 1175 ntBASIC18.65■□□□□ 0.58
VAPBO95292 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.65■□□□□ 0.58
VAPBO95292 AP006294.2-201ENST00000641667 209 ntBASIC18.65■□□□□ 0.58
VAPBO95292 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
VAPBO95292 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VAPBO95292 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.65■□□□□ 0.58
VAPBO95292 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VAPBO95292 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.65■□□□□ 0.58
VAPBO95292 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
VAPBO95292 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.65■□□□□ 0.58
VAPBO95292 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VAPBO95292 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
VAPBO95292 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VAPBO95292 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VAPBO95292 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
VAPBO95292 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VAPBO95292 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.58
VAPBO95292 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
VAPBO95292 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
VAPBO95292 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
VAPBO95292 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
VAPBO95292 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
VAPBO95292 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.64■□□□□ 0.57
VAPBO95292 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VAPBO95292 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VAPBO95292 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
VAPBO95292 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.64■□□□□ 0.57
VAPBO95292 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.64■□□□□ 0.57
VAPBO95292 UNC93B2-201ENST00000285383 730 ntBASIC18.64■□□□□ 0.57
VAPBO95292 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
VAPBO95292 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VAPBO95292 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.64■□□□□ 0.57
VAPBO95292 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VAPBO95292 MIR564-202ENST00000385049 94 ntBASIC18.64■□□□□ 0.57
VAPBO95292 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VAPBO95292 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
VAPBO95292 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.64■□□□□ 0.57
VAPBO95292 MIR4785-201ENST00000585005 73 ntBASIC18.64■□□□□ 0.57
VAPBO95292 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
VAPBO95292 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.64■□□□□ 0.57
VAPBO95292 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
VAPBO95292 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VAPBO95292 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VAPBO95292 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
VAPBO95292 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.64■□□□□ 0.57
VAPBO95292 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.64■□□□□ 0.57
VAPBO95292 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VAPBO95292 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VAPBO95292 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
VAPBO95292 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VAPBO95292 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
VAPBO95292 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VAPBO95292 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
VAPBO95292 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VAPBO95292 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VAPBO95292 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VAPBO95292 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VAPBO95292 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
VAPBO95292 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.63■□□□□ 0.57
VAPBO95292 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.63■□□□□ 0.57
VAPBO95292 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms