Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLSTN1O94985 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLSTN1O94985 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLSTN1O94985 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CLSTN1O94985 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLSTN1O94985 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
CLSTN1O94985 DGCR10-201ENST00000609839 495 ntBASIC20.53■□□□□ 0.88
CLSTN1O94985 AC130371.2-201ENST00000619443 611 ntBASIC20.53■□□□□ 0.88
CLSTN1O94985 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLSTN1O94985 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLSTN1O94985 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CLSTN1O94985 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CLSTN1O94985 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CLSTN1O94985 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLSTN1O94985 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLSTN1O94985 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLSTN1O94985 AL161938.1-201ENST00000569833 2180 ntBASIC20.53■□□□□ 0.88
CLSTN1O94985 AL049812.1-201ENST00000432563 2267 ntBASIC20.53■□□□□ 0.88
CLSTN1O94985 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLSTN1O94985 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CLSTN1O94985 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLSTN1O94985 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CLSTN1O94985 CROCCP3-202ENST00000420820 1947 ntBASIC20.53■□□□□ 0.88
CLSTN1O94985 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CLSTN1O94985 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLSTN1O94985 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLSTN1O94985 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CLSTN1O94985 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CLSTN1O94985 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLSTN1O94985 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLSTN1O94985 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLSTN1O94985 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CLSTN1O94985 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.52■□□□□ 0.88
CLSTN1O94985 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLSTN1O94985 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CLSTN1O94985 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.52■□□□□ 0.88
CLSTN1O94985 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.52■□□□□ 0.88
CLSTN1O94985 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.52■□□□□ 0.88
CLSTN1O94985 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLSTN1O94985 MESTP1-201ENST00000404287 994 ntBASIC20.52■□□□□ 0.88
CLSTN1O94985 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CLSTN1O94985 AC116562.2-201ENST00000507042 360 ntBASIC20.52■□□□□ 0.88
CLSTN1O94985 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLSTN1O94985 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.52■□□□□ 0.88
CLSTN1O94985 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLSTN1O94985 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLSTN1O94985 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLSTN1O94985 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CLSTN1O94985 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.87
CLSTN1O94985 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CLSTN1O94985 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CLSTN1O94985 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.52■□□□□ 0.87
CLSTN1O94985 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLSTN1O94985 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CLSTN1O94985 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
CLSTN1O94985 AC011270.2-201ENST00000624293 2550 ntBASIC20.51■□□□□ 0.87
CLSTN1O94985 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLSTN1O94985 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLSTN1O94985 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.51■□□□□ 0.87
CLSTN1O94985 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
CLSTN1O94985 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CLSTN1O94985 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CLSTN1O94985 PRSS44-201ENST00000515154 1146 ntBASIC20.51■□□□□ 0.87
CLSTN1O94985 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.51■□□□□ 0.87
CLSTN1O94985 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.51■□□□□ 0.87
CLSTN1O94985 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC20.51■□□□□ 0.87
CLSTN1O94985 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.51■□□□□ 0.87
CLSTN1O94985 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
CLSTN1O94985 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
CLSTN1O94985 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLSTN1O94985 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLSTN1O94985 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.51■□□□□ 0.87
CLSTN1O94985 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLSTN1O94985 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CLSTN1O94985 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLSTN1O94985 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLSTN1O94985 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLSTN1O94985 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLSTN1O94985 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLSTN1O94985 PKD1P5-201ENST00000532415 10291 ntBASIC20.5■□□□□ 0.87
CLSTN1O94985 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.5■□□□□ 0.87
CLSTN1O94985 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLSTN1O94985 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLSTN1O94985 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLSTN1O94985 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLSTN1O94985 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.5■□□□□ 0.87
CLSTN1O94985 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLSTN1O94985 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLSTN1O94985 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CLSTN1O94985 TSPY15P-201ENST00000457163 923 ntBASIC20.5■□□□□ 0.87
CLSTN1O94985 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.5■□□□□ 0.87
CLSTN1O94985 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CLSTN1O94985 AP000692.2-201ENST00000608391 879 ntBASIC20.5■□□□□ 0.87
CLSTN1O94985 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.5■□□□□ 0.87
CLSTN1O94985 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.5■□□□□ 0.87
CLSTN1O94985 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CLSTN1O94985 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLSTN1O94985 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CLSTN1O94985 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.5■□□□□ 0.87
CLSTN1O94985 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms