Protein–RNA interactions for Protein: O60506

SYNCRIP, Heterogeneous nuclear ribonucleoprotein Q, humanhuman

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIPO60506 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SYNCRIPO60506 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SYNCRIPO60506 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SYNCRIPO60506 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SYNCRIPO60506 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.95■□□□□ 0.62
SYNCRIPO60506 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SYNCRIPO60506 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
SYNCRIPO60506 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SYNCRIPO60506 KRT126P-201ENST00000549467 1181 ntBASIC18.95■□□□□ 0.62
SYNCRIPO60506 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.95■□□□□ 0.62
SYNCRIPO60506 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.95■□□□□ 0.62
SYNCRIPO60506 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.95■□□□□ 0.62
SYNCRIPO60506 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SYNCRIPO60506 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SYNCRIPO60506 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
SYNCRIPO60506 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SYNCRIPO60506 AL512353.2-201ENST00000448759 1962 ntBASIC18.95■□□□□ 0.62
SYNCRIPO60506 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SYNCRIPO60506 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SYNCRIPO60506 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SYNCRIPO60506 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SYNCRIPO60506 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SYNCRIPO60506 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.94■□□□□ 0.62
SYNCRIPO60506 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SYNCRIPO60506 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SYNCRIPO60506 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SYNCRIPO60506 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.94■□□□□ 0.62
SYNCRIPO60506 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SYNCRIPO60506 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.94■□□□□ 0.62
SYNCRIPO60506 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
SYNCRIPO60506 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.94■□□□□ 0.62
SYNCRIPO60506 SEC1P-202ENST00000473944 940 ntBASIC18.94■□□□□ 0.62
SYNCRIPO60506 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.94■□□□□ 0.62
SYNCRIPO60506 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.94■□□□□ 0.62
SYNCRIPO60506 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.94■□□□□ 0.62
SYNCRIPO60506 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.94■□□□□ 0.62
SYNCRIPO60506 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
SYNCRIPO60506 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.94■□□□□ 0.62
SYNCRIPO60506 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SYNCRIPO60506 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SYNCRIPO60506 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SYNCRIPO60506 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
SYNCRIPO60506 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SYNCRIPO60506 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SYNCRIPO60506 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
SYNCRIPO60506 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.94■□□□□ 0.62
SYNCRIPO60506 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.94■□□□□ 0.62
SYNCRIPO60506 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SYNCRIPO60506 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.93■□□□□ 0.62
SYNCRIPO60506 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SYNCRIPO60506 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
SYNCRIPO60506 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SYNCRIPO60506 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SYNCRIPO60506 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
SYNCRIPO60506 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SYNCRIPO60506 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SYNCRIPO60506 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SYNCRIPO60506 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
SYNCRIPO60506 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SYNCRIPO60506 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.93■□□□□ 0.62
SYNCRIPO60506 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SYNCRIPO60506 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.93■□□□□ 0.62
SYNCRIPO60506 SPDYE13P-201ENST00000445314 798 ntBASIC18.93■□□□□ 0.62
SYNCRIPO60506 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.93■□□□□ 0.62
SYNCRIPO60506 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.93■□□□□ 0.62
SYNCRIPO60506 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SYNCRIPO60506 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SYNCRIPO60506 FEM1AP3-201ENST00000403722 1741 ntBASIC18.93■□□□□ 0.62
SYNCRIPO60506 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SYNCRIPO60506 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SYNCRIPO60506 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
SYNCRIPO60506 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.93■□□□□ 0.62
SYNCRIPO60506 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.93■□□□□ 0.62
SYNCRIPO60506 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SYNCRIPO60506 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYNCRIPO60506 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYNCRIPO60506 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYNCRIPO60506 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYNCRIPO60506 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYNCRIPO60506 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYNCRIPO60506 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYNCRIPO60506 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.92■□□□□ 0.62
SYNCRIPO60506 AC008556.1-201ENST00000610908 2040 ntBASIC18.92■□□□□ 0.62
SYNCRIPO60506 KRT18P23-201ENST00000435622 1283 ntBASIC18.92■□□□□ 0.62
SYNCRIPO60506 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SYNCRIPO60506 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.92■□□□□ 0.62
SYNCRIPO60506 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.92■□□□□ 0.62
SYNCRIPO60506 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.92■□□□□ 0.62
SYNCRIPO60506 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.92■□□□□ 0.62
SYNCRIPO60506 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
SYNCRIPO60506 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.92■□□□□ 0.62
SYNCRIPO60506 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
SYNCRIPO60506 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
SYNCRIPO60506 KRT8P7-201ENST00000533003 1432 ntBASIC18.91■□□□□ 0.62
SYNCRIPO60506 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SYNCRIPO60506 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.91■□□□□ 0.62
SYNCRIPO60506 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYNCRIPO60506 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYNCRIPO60506 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYNCRIPO60506 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms