Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ZIC3O60481 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ZIC3O60481 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ZIC3O60481 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.68■□□□□ 0.26
ZIC3O60481 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
ZIC3O60481 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ZIC3O60481 AC093503.3-201ENST00000624917 2352 ntBASIC16.67■□□□□ 0.26
ZIC3O60481 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZIC3O60481 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC16.67■□□□□ 0.26
ZIC3O60481 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZIC3O60481 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZIC3O60481 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
ZIC3O60481 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ZIC3O60481 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
ZIC3O60481 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ZIC3O60481 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.67■□□□□ 0.26
ZIC3O60481 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
ZIC3O60481 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ZIC3O60481 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
ZIC3O60481 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ZIC3O60481 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZIC3O60481 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ZIC3O60481 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZIC3O60481 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ZIC3O60481 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.67■□□□□ 0.26
ZIC3O60481 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.67■□□□□ 0.26
ZIC3O60481 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.67■□□□□ 0.26
ZIC3O60481 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.67■□□□□ 0.26
ZIC3O60481 AL136038.4-201ENST00000603606 1261 ntBASIC16.67■□□□□ 0.26
ZIC3O60481 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ZIC3O60481 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
ZIC3O60481 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ZIC3O60481 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZIC3O60481 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZIC3O60481 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.67■□□□□ 0.26
ZIC3O60481 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZIC3O60481 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
ZIC3O60481 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ZIC3O60481 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.66■□□□□ 0.26
ZIC3O60481 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZIC3O60481 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ZIC3O60481 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ZIC3O60481 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC16.66■□□□□ 0.26
ZIC3O60481 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZIC3O60481 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
ZIC3O60481 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
ZIC3O60481 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ZIC3O60481 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ZIC3O60481 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
ZIC3O60481 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ZIC3O60481 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZIC3O60481 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.66■□□□□ 0.26
ZIC3O60481 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZIC3O60481 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZIC3O60481 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZIC3O60481 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ZIC3O60481 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.66■□□□□ 0.26
ZIC3O60481 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ZIC3O60481 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ZIC3O60481 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
ZIC3O60481 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.66■□□□□ 0.26
ZIC3O60481 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.66■□□□□ 0.26
ZIC3O60481 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.66■□□□□ 0.26
ZIC3O60481 AL358472.4-201ENST00000633140 710 ntBASIC16.66■□□□□ 0.26
ZIC3O60481 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZIC3O60481 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZIC3O60481 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.66■□□□□ 0.26
ZIC3O60481 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZIC3O60481 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.66■□□□□ 0.26
ZIC3O60481 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ZIC3O60481 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZIC3O60481 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZIC3O60481 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZIC3O60481 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZIC3O60481 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
ZIC3O60481 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.65■□□□□ 0.26
ZIC3O60481 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZIC3O60481 AC099343.3-201ENST00000605834 2503 ntBASIC16.65■□□□□ 0.26
ZIC3O60481 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZIC3O60481 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ZIC3O60481 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.65■□□□□ 0.26
ZIC3O60481 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ZIC3O60481 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.65■□□□□ 0.26
ZIC3O60481 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZIC3O60481 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ZIC3O60481 MIR149-201ENST00000384879 89 ntBASIC16.65■□□□□ 0.26
ZIC3O60481 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
ZIC3O60481 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.65■□□□□ 0.26
ZIC3O60481 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.65■□□□□ 0.26
ZIC3O60481 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.65■□□□□ 0.26
ZIC3O60481 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.65■□□□□ 0.26
ZIC3O60481 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ZIC3O60481 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.65■□□□□ 0.26
ZIC3O60481 SDHAP2-201ENST00000455183 2001 ntBASIC16.65■□□□□ 0.26
ZIC3O60481 AC005332.1-201ENST00000577698 1310 ntBASIC16.65■□□□□ 0.26
ZIC3O60481 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
ZIC3O60481 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ZIC3O60481 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
ZIC3O60481 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZIC3O60481 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms