Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH7O60245 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
PCDH7O60245 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH7O60245 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDH7O60245 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH7O60245 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PCDH7O60245 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDH7O60245 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDH7O60245 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDH7O60245 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDH7O60245 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.74■□□□□ 0.43
PCDH7O60245 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDH7O60245 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PCDH7O60245 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDH7O60245 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
PCDH7O60245 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDH7O60245 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
PCDH7O60245 UNC93B2-201ENST00000285383 730 ntBASIC17.74■□□□□ 0.43
PCDH7O60245 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDH7O60245 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDH7O60245 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.74■□□□□ 0.43
PCDH7O60245 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.74■□□□□ 0.43
PCDH7O60245 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.74■□□□□ 0.43
PCDH7O60245 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDH7O60245 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDH7O60245 AC018470.1-201ENST00000624790 3129 ntBASIC17.74■□□□□ 0.43
PCDH7O60245 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDH7O60245 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.74■□□□□ 0.43
PCDH7O60245 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDH7O60245 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
PCDH7O60245 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDH7O60245 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDH7O60245 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDH7O60245 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
PCDH7O60245 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDH7O60245 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.74■□□□□ 0.43
PCDH7O60245 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDH7O60245 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDH7O60245 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDH7O60245 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDH7O60245 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDH7O60245 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDH7O60245 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
PCDH7O60245 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDH7O60245 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
PCDH7O60245 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDH7O60245 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDH7O60245 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDH7O60245 MIR564-202ENST00000385049 94 ntBASIC17.73■□□□□ 0.43
PCDH7O60245 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
PCDH7O60245 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
PCDH7O60245 RBM17P1-201ENST00000453646 1190 ntBASIC17.73■□□□□ 0.43
PCDH7O60245 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.73■□□□□ 0.43
PCDH7O60245 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.73■□□□□ 0.43
PCDH7O60245 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.73■□□□□ 0.43
PCDH7O60245 AP006294.2-201ENST00000641667 209 ntBASIC17.73■□□□□ 0.43
PCDH7O60245 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDH7O60245 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDH7O60245 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDH7O60245 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDH7O60245 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDH7O60245 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
PCDH7O60245 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDH7O60245 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDH7O60245 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
PCDH7O60245 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDH7O60245 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
PCDH7O60245 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDH7O60245 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDH7O60245 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDH7O60245 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDH7O60245 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDH7O60245 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDH7O60245 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDH7O60245 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDH7O60245 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.72■□□□□ 0.43
PCDH7O60245 MYLKP1-201ENST00000509077 1580 ntBASIC17.72■□□□□ 0.43
PCDH7O60245 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDH7O60245 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PCDH7O60245 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDH7O60245 KRT18P41-201ENST00000518924 1277 ntBASIC17.72■□□□□ 0.43
PCDH7O60245 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDH7O60245 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.72■□□□□ 0.43
PCDH7O60245 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDH7O60245 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PCDH7O60245 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDH7O60245 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDH7O60245 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDH7O60245 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDH7O60245 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDH7O60245 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDH7O60245 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDH7O60245 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDH7O60245 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDH7O60245 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDH7O60245 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDH7O60245 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDH7O60245 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDH7O60245 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.71■□□□□ 0.43
PCDH7O60245 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms