Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
FOXN1O15353 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
FOXN1O15353 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
FOXN1O15353 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC22.11■■□□□ 1.13
FOXN1O15353 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
FOXN1O15353 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
FOXN1O15353 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
FOXN1O15353 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
FOXN1O15353 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
FOXN1O15353 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
FOXN1O15353 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
FOXN1O15353 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC22.11■■□□□ 1.13
FOXN1O15353 MIR662-201ENST00000384847 95 ntBASIC22.11■■□□□ 1.13
FOXN1O15353 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
FOXN1O15353 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC22.11■■□□□ 1.13
FOXN1O15353 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
FOXN1O15353 HLA-F-220ENST00000434407 884 ntBASIC22.11■■□□□ 1.13
FOXN1O15353 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC22.11■■□□□ 1.13
FOXN1O15353 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
FOXN1O15353 AF186996.4-201ENST00000467186 377 ntBASIC22.11■■□□□ 1.13
FOXN1O15353 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC22.11■■□□□ 1.13
FOXN1O15353 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC22.11■■□□□ 1.13
FOXN1O15353 AL049840.3-201ENST00000602669 611 ntBASIC22.11■■□□□ 1.13
FOXN1O15353 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
FOXN1O15353 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
FOXN1O15353 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
FOXN1O15353 AC233702.3-201ENST00000578656 1387 ntBASIC22.11■■□□□ 1.13
FOXN1O15353 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC22.11■■□□□ 1.13
FOXN1O15353 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC22.1■■□□□ 1.13
FOXN1O15353 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
FOXN1O15353 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
FOXN1O15353 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
FOXN1O15353 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
FOXN1O15353 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
FOXN1O15353 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC22.1■■□□□ 1.13
FOXN1O15353 LBH-203ENST00000404397 543 ntTSL 4 BASIC22.1■■□□□ 1.13
FOXN1O15353 LBH-204ENST00000406087 559 ntTSL 4 BASIC22.1■■□□□ 1.13
FOXN1O15353 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC22.1■■□□□ 1.13
FOXN1O15353 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC22.1■■□□□ 1.13
FOXN1O15353 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC22.1■■□□□ 1.13
FOXN1O15353 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
FOXN1O15353 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC22.1■■□□□ 1.13
FOXN1O15353 AC092364.2-202ENST00000597012 1073 ntBASIC22.1■■□□□ 1.13
FOXN1O15353 AC024243.1-201ENST00000609234 778 ntBASIC22.1■■□□□ 1.13
FOXN1O15353 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
FOXN1O15353 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC22.1■■□□□ 1.13
FOXN1O15353 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
FOXN1O15353 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
FOXN1O15353 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
FOXN1O15353 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC22.1■■□□□ 1.13
FOXN1O15353 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
FOXN1O15353 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC22.1■■□□□ 1.13
FOXN1O15353 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC22.1■■□□□ 1.13
FOXN1O15353 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC22.1■■□□□ 1.13
FOXN1O15353 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC22.1■■□□□ 1.13
FOXN1O15353 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
FOXN1O15353 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
FOXN1O15353 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
FOXN1O15353 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
FOXN1O15353 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
FOXN1O15353 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
FOXN1O15353 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
FOXN1O15353 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
FOXN1O15353 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
FOXN1O15353 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC22.09■■□□□ 1.13
FOXN1O15353 AC112482.1-201ENST00000492080 688 ntBASIC22.09■■□□□ 1.13
FOXN1O15353 AC139887.3-201ENST00000568585 713 ntBASIC22.09■■□□□ 1.13
FOXN1O15353 LITAF-211ENST00000572255 516 ntTSL 4 BASIC22.09■■□□□ 1.13
FOXN1O15353 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC22.09■■□□□ 1.13
FOXN1O15353 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
FOXN1O15353 MIR7706-201ENST00000613747 67 ntBASIC22.09■■□□□ 1.13
FOXN1O15353 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC22.09■■□□□ 1.13
FOXN1O15353 CAND2-206ENST00000626378 333 ntTSL 5 BASIC22.09■■□□□ 1.13
FOXN1O15353 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC22.09■■□□□ 1.13
FOXN1O15353 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
FOXN1O15353 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
FOXN1O15353 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
FOXN1O15353 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
FOXN1O15353 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
FOXN1O15353 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC22.09■■□□□ 1.13
FOXN1O15353 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC22.09■■□□□ 1.13
FOXN1O15353 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
FOXN1O15353 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
FOXN1O15353 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC22.09■■□□□ 1.13
FOXN1O15353 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
FOXN1O15353 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC22.09■■□□□ 1.13
FOXN1O15353 PTGES2-AS1-201ENST00000443493 2100 ntBASIC22.09■■□□□ 1.13
FOXN1O15353 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
FOXN1O15353 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
FOXN1O15353 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC22.08■■□□□ 1.13
FOXN1O15353 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC22.08■■□□□ 1.13
FOXN1O15353 AL020996.1-203ENST00000536896 2307 ntBASIC22.08■■□□□ 1.13
FOXN1O15353 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
FOXN1O15353 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
FOXN1O15353 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
FOXN1O15353 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC22.08■■□□□ 1.13
FOXN1O15353 FIS1-203ENST00000442303 631 ntTSL 3 BASIC22.08■■□□□ 1.13
FOXN1O15353 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC22.08■■□□□ 1.13
FOXN1O15353 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC22.08■■□□□ 1.13
FOXN1O15353 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms