Protein–RNA interactions for Protein: O14521

SDHD, Succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDO14521 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.94■□□□□ 0.46
SDHDO14521 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SDHDO14521 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SDHDO14521 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SDHDO14521 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SDHDO14521 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SDHDO14521 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SDHDO14521 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
SDHDO14521 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SDHDO14521 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.94■□□□□ 0.46
SDHDO14521 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
SDHDO14521 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SDHDO14521 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SDHDO14521 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
SDHDO14521 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.94■□□□□ 0.46
SDHDO14521 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SDHDO14521 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SDHDO14521 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
SDHDO14521 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
SDHDO14521 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
SDHDO14521 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.94■□□□□ 0.46
SDHDO14521 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.94■□□□□ 0.46
SDHDO14521 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.94■□□□□ 0.46
SDHDO14521 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SDHDO14521 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SDHDO14521 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
SDHDO14521 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.93■□□□□ 0.46
SDHDO14521 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
SDHDO14521 FLJ13224-201ENST00000313737 1514 ntBASIC17.93■□□□□ 0.46
SDHDO14521 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.93■□□□□ 0.46
SDHDO14521 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SDHDO14521 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SDHDO14521 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SDHDO14521 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
SDHDO14521 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SDHDO14521 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SDHDO14521 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.93■□□□□ 0.46
SDHDO14521 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.93■□□□□ 0.46
SDHDO14521 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.93■□□□□ 0.46
SDHDO14521 AC026366.1-201ENST00000488803 879 ntBASIC17.93■□□□□ 0.46
SDHDO14521 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.93■□□□□ 0.46
SDHDO14521 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.93■□□□□ 0.46
SDHDO14521 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.93■□□□□ 0.46
SDHDO14521 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.93■□□□□ 0.46
SDHDO14521 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
SDHDO14521 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SDHDO14521 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.93■□□□□ 0.46
SDHDO14521 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.93■□□□□ 0.46
SDHDO14521 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.93■□□□□ 0.46
SDHDO14521 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SDHDO14521 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
SDHDO14521 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SDHDO14521 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SDHDO14521 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.93■□□□□ 0.46
SDHDO14521 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SDHDO14521 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
SDHDO14521 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SDHDO14521 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SDHDO14521 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SDHDO14521 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
SDHDO14521 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
SDHDO14521 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SDHDO14521 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SDHDO14521 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SDHDO14521 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SDHDO14521 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.92■□□□□ 0.46
SDHDO14521 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SDHDO14521 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SDHDO14521 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
SDHDO14521 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SDHDO14521 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SDHDO14521 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SDHDO14521 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.92■□□□□ 0.46
SDHDO14521 AC004951.3-201ENST00000418645 1148 ntBASIC17.92■□□□□ 0.46
SDHDO14521 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.92■□□□□ 0.46
SDHDO14521 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.92■□□□□ 0.46
SDHDO14521 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
SDHDO14521 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
SDHDO14521 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.92■□□□□ 0.46
SDHDO14521 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SDHDO14521 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.92■□□□□ 0.46
SDHDO14521 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SDHDO14521 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SDHDO14521 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SDHDO14521 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SDHDO14521 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SDHDO14521 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.92■□□□□ 0.46
SDHDO14521 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SDHDO14521 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.92■□□□□ 0.46
SDHDO14521 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SDHDO14521 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.92■□□□□ 0.46
SDHDO14521 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SDHDO14521 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SDHDO14521 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SDHDO14521 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.91■□□□□ 0.46
SDHDO14521 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SDHDO14521 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.91■□□□□ 0.46
SDHDO14521 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SDHDO14521 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SDHDO14521 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms