Protein–RNA interactions for Protein: K7ERE1

TMEM256-PLSCR3, TMEM256-PLSCR3 readthrough (NMD candidate), humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM256-PLSCR3K7ERE1 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 GRAMD4P2-201ENST00000423297 1097 ntBASIC11.76□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC11.76□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 YBX1P1-201ENST00000445822 960 ntBASIC11.76□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC11.76□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 AC023632.3-201ENST00000521633 145 ntBASIC11.76□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC11.76□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC11.76□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 TK2-221ENST00000620035 5060 ntTSL 2 BASIC11.76□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC11.76□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC11.76□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC11.76□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC11.76□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC11.76□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC11.76□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC11.76□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 AC018695.7-201ENST00000624587 2492 ntBASIC11.76□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC11.76□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 FLJ13224-201ENST00000313737 1514 ntBASIC11.76□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC11.76□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC11.75□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 AC116351.2-201ENST00000606540 1585 ntBASIC11.75□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC11.75□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 FLYWCH1P1-201ENST00000460917 1874 ntBASIC11.75□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC11.75□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC11.75□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC11.75□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 MIR4767-201ENST00000582827 78 ntBASIC11.75□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 TPRG1LP1-201ENST00000598702 760 ntBASIC11.75□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC11.75□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC11.75□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC11.75□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC11.75□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC11.75□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 NF2-208ENST00000403435 2568 ntTSL 5 BASIC11.74□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC11.74□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
TMEM256-PLSCR3K7ERE1 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms