Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
SPDYE4A6NLX3 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SPDYE4A6NLX3 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SPDYE4A6NLX3 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
SPDYE4A6NLX3 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SPDYE4A6NLX3 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SPDYE4A6NLX3 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.9■□□□□ 0.94
SPDYE4A6NLX3 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SPDYE4A6NLX3 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
SPDYE4A6NLX3 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SPDYE4A6NLX3 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SPDYE4A6NLX3 KRT8P17-201ENST00000453110 1448 ntBASIC20.9■□□□□ 0.94
SPDYE4A6NLX3 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SPDYE4A6NLX3 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
SPDYE4A6NLX3 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SPDYE4A6NLX3 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.9■□□□□ 0.94
SPDYE4A6NLX3 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.9■□□□□ 0.94
SPDYE4A6NLX3 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.9■□□□□ 0.94
SPDYE4A6NLX3 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC20.9■□□□□ 0.94
SPDYE4A6NLX3 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.9■□□□□ 0.94
SPDYE4A6NLX3 SLC25A3P1-201ENST00000443844 931 ntBASIC20.9■□□□□ 0.94
SPDYE4A6NLX3 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.9■□□□□ 0.94
SPDYE4A6NLX3 AC116562.2-201ENST00000507042 360 ntBASIC20.9■□□□□ 0.94
SPDYE4A6NLX3 C2orf69P3-201ENST00000565542 1120 ntBASIC20.9■□□□□ 0.94
SPDYE4A6NLX3 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.9■□□□□ 0.94
SPDYE4A6NLX3 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.9■□□□□ 0.94
SPDYE4A6NLX3 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SPDYE4A6NLX3 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
SPDYE4A6NLX3 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
SPDYE4A6NLX3 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SPDYE4A6NLX3 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
SPDYE4A6NLX3 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SPDYE4A6NLX3 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SPDYE4A6NLX3 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SPDYE4A6NLX3 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SPDYE4A6NLX3 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.9■□□□□ 0.94
SPDYE4A6NLX3 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SPDYE4A6NLX3 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC20.89■□□□□ 0.94
SPDYE4A6NLX3 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SPDYE4A6NLX3 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.94
SPDYE4A6NLX3 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SPDYE4A6NLX3 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.94
SPDYE4A6NLX3 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.89■□□□□ 0.93
SPDYE4A6NLX3 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SPDYE4A6NLX3 TERF1P1-201ENST00000311003 1181 ntBASIC20.89■□□□□ 0.93
SPDYE4A6NLX3 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
SPDYE4A6NLX3 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SPDYE4A6NLX3 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
SPDYE4A6NLX3 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.89■□□□□ 0.93
SPDYE4A6NLX3 AC010422.1-201ENST00000414548 543 ntTSL 2 BASIC20.89■□□□□ 0.93
SPDYE4A6NLX3 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.89■□□□□ 0.93
SPDYE4A6NLX3 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
SPDYE4A6NLX3 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.89■□□□□ 0.93
SPDYE4A6NLX3 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SPDYE4A6NLX3 AL354751.1-201ENST00000412768 1863 ntBASIC20.89■□□□□ 0.93
SPDYE4A6NLX3 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
SPDYE4A6NLX3 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC20.89■□□□□ 0.93
SPDYE4A6NLX3 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SPDYE4A6NLX3 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SPDYE4A6NLX3 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
SPDYE4A6NLX3 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
SPDYE4A6NLX3 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC20.89■□□□□ 0.93
SPDYE4A6NLX3 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SPDYE4A6NLX3 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SPDYE4A6NLX3 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
SPDYE4A6NLX3 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SPDYE4A6NLX3 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SPDYE4A6NLX3 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
SPDYE4A6NLX3 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SPDYE4A6NLX3 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SPDYE4A6NLX3 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.88■□□□□ 0.93
SPDYE4A6NLX3 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SPDYE4A6NLX3 ANKRD19P-201ENST00000338192 862 ntBASIC20.88■□□□□ 0.93
SPDYE4A6NLX3 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SPDYE4A6NLX3 AC087388.1-201ENST00000571370 1112 ntBASIC20.88■□□□□ 0.93
SPDYE4A6NLX3 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.88■□□□□ 0.93
SPDYE4A6NLX3 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
SPDYE4A6NLX3 AC079791.1-201ENST00000605356 973 ntBASIC20.88■□□□□ 0.93
SPDYE4A6NLX3 AC090164.3-201ENST00000610780 2143 ntBASIC20.88■□□□□ 0.93
SPDYE4A6NLX3 AC010947.1-201ENST00000623454 693 ntBASIC20.88■□□□□ 0.93
SPDYE4A6NLX3 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SPDYE4A6NLX3 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SPDYE4A6NLX3 PTBP1P-201ENST00000554374 1601 ntBASIC20.88■□□□□ 0.93
SPDYE4A6NLX3 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
SPDYE4A6NLX3 AC124067.4-201ENST00000519691 2379 ntBASIC20.88■□□□□ 0.93
SPDYE4A6NLX3 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC20.88■□□□□ 0.93
SPDYE4A6NLX3 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.88■□□□□ 0.93
SPDYE4A6NLX3 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.88■□□□□ 0.93
SPDYE4A6NLX3 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC20.88■□□□□ 0.93
SPDYE4A6NLX3 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SPDYE4A6NLX3 FSCN1P1-201ENST00000568912 1481 ntBASIC20.88■□□□□ 0.93
SPDYE4A6NLX3 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.87■□□□□ 0.93
SPDYE4A6NLX3 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
SPDYE4A6NLX3 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
SPDYE4A6NLX3 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SPDYE4A6NLX3 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SPDYE4A6NLX3 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SPDYE4A6NLX3 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC20.87■□□□□ 0.93
SPDYE4A6NLX3 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SPDYE4A6NLX3 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms