Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 NKILA-202ENST00000614771 2598 ntBASIC16.18■□□□□ 0.18
SHISA3A0PJX4 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHISA3A0PJX4 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC16.18■□□□□ 0.18
SHISA3A0PJX4 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHISA3A0PJX4 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHISA3A0PJX4 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHISA3A0PJX4 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHISA3A0PJX4 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SHISA3A0PJX4 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SHISA3A0PJX4 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SHISA3A0PJX4 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC16.18■□□□□ 0.18
SHISA3A0PJX4 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC16.18■□□□□ 0.18
SHISA3A0PJX4 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC16.18■□□□□ 0.18
SHISA3A0PJX4 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC16.18■□□□□ 0.18
SHISA3A0PJX4 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.18■□□□□ 0.18
SHISA3A0PJX4 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHISA3A0PJX4 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHISA3A0PJX4 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SHISA3A0PJX4 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHISA3A0PJX4 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SHISA3A0PJX4 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHISA3A0PJX4 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
SHISA3A0PJX4 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.18■□□□□ 0.18
SHISA3A0PJX4 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC16.18■□□□□ 0.18
SHISA3A0PJX4 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHISA3A0PJX4 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SHISA3A0PJX4 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHISA3A0PJX4 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.18■□□□□ 0.18
SHISA3A0PJX4 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SHISA3A0PJX4 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SHISA3A0PJX4 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SHISA3A0PJX4 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SHISA3A0PJX4 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
SHISA3A0PJX4 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
SHISA3A0PJX4 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.17■□□□□ 0.18
SHISA3A0PJX4 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC16.17■□□□□ 0.18
SHISA3A0PJX4 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
SHISA3A0PJX4 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SHISA3A0PJX4 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.17■□□□□ 0.18
SHISA3A0PJX4 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SHISA3A0PJX4 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SHISA3A0PJX4 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SHISA3A0PJX4 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC16.17■□□□□ 0.18
SHISA3A0PJX4 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.17■□□□□ 0.18
SHISA3A0PJX4 GATS-209ENST00000454084 1030 ntTSL 3 BASIC16.17■□□□□ 0.18
SHISA3A0PJX4 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC16.17■□□□□ 0.18
SHISA3A0PJX4 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SHISA3A0PJX4 BET1L-207ENST00000529614 560 ntTSL 5 BASIC16.17■□□□□ 0.18
SHISA3A0PJX4 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
SHISA3A0PJX4 C1QL1P1-201ENST00000568105 661 ntBASIC16.17■□□□□ 0.18
SHISA3A0PJX4 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SHISA3A0PJX4 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.17■□□□□ 0.18
SHISA3A0PJX4 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SHISA3A0PJX4 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SHISA3A0PJX4 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SHISA3A0PJX4 KRT8P3-201ENST00000519669 1449 ntBASIC16.17■□□□□ 0.18
SHISA3A0PJX4 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SHISA3A0PJX4 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SHISA3A0PJX4 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SHISA3A0PJX4 AP001094.4-201ENST00000579008 2176 ntBASIC16.17■□□□□ 0.18
SHISA3A0PJX4 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SHISA3A0PJX4 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SHISA3A0PJX4 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SHISA3A0PJX4 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SHISA3A0PJX4 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.17■□□□□ 0.18
SHISA3A0PJX4 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.17■□□□□ 0.18
SHISA3A0PJX4 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SHISA3A0PJX4 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SHISA3A0PJX4 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SHISA3A0PJX4 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SHISA3A0PJX4 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SHISA3A0PJX4 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SHISA3A0PJX4 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SHISA3A0PJX4 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SHISA3A0PJX4 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SHISA3A0PJX4 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SHISA3A0PJX4 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SHISA3A0PJX4 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SHISA3A0PJX4 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
SHISA3A0PJX4 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SHISA3A0PJX4 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SHISA3A0PJX4 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SHISA3A0PJX4 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SHISA3A0PJX4 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SHISA3A0PJX4 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC16.16■□□□□ 0.18
SHISA3A0PJX4 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SHISA3A0PJX4 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SHISA3A0PJX4 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC16.16■□□□□ 0.18
SHISA3A0PJX4 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC16.16■□□□□ 0.18
SHISA3A0PJX4 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SHISA3A0PJX4 AL137784.2-201ENST00000607332 1000 ntBASIC16.16■□□□□ 0.18
SHISA3A0PJX4 HLA-B-256ENST00000639848 1089 ntBASIC16.16■□□□□ 0.18
SHISA3A0PJX4 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
SHISA3A0PJX4 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SHISA3A0PJX4 KRT8P11-201ENST00000409686 1436 ntBASIC16.16■□□□□ 0.18
SHISA3A0PJX4 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.16■□□□□ 0.18
SHISA3A0PJX4 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.16■□□□□ 0.18
SHISA3A0PJX4 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.16■□□□□ 0.18
SHISA3A0PJX4 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.16■□□□□ 0.18
SHISA3A0PJX4 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms