Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN16Q9Y5I7 AL391807.1-203ENST00000604392 2365 ntBASIC17.25■□□□□ 0.35
CLDN16Q9Y5I7 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN16Q9Y5I7 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CLDN16Q9Y5I7 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.25■□□□□ 0.35
CLDN16Q9Y5I7 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN16Q9Y5I7 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN16Q9Y5I7 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CLDN16Q9Y5I7 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN16Q9Y5I7 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN16Q9Y5I7 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CLDN16Q9Y5I7 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN16Q9Y5I7 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN16Q9Y5I7 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN16Q9Y5I7 PVRIG2P-201ENST00000435460 978 ntBASIC17.25■□□□□ 0.35
CLDN16Q9Y5I7 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.25■□□□□ 0.35
CLDN16Q9Y5I7 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.25■□□□□ 0.35
CLDN16Q9Y5I7 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.25■□□□□ 0.35
CLDN16Q9Y5I7 AL671277.2-201ENST00000458060 996 ntBASIC17.25■□□□□ 0.35
CLDN16Q9Y5I7 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.25■□□□□ 0.35
CLDN16Q9Y5I7 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.25■□□□□ 0.35
CLDN16Q9Y5I7 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
CLDN16Q9Y5I7 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.25■□□□□ 0.35
CLDN16Q9Y5I7 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.25■□□□□ 0.35
CLDN16Q9Y5I7 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.25■□□□□ 0.35
CLDN16Q9Y5I7 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.25■□□□□ 0.35
CLDN16Q9Y5I7 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.25■□□□□ 0.35
CLDN16Q9Y5I7 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.25■□□□□ 0.35
CLDN16Q9Y5I7 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN16Q9Y5I7 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN16Q9Y5I7 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN16Q9Y5I7 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN16Q9Y5I7 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CLDN16Q9Y5I7 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN16Q9Y5I7 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CLDN16Q9Y5I7 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN16Q9Y5I7 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN16Q9Y5I7 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN16Q9Y5I7 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CLDN16Q9Y5I7 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN16Q9Y5I7 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN16Q9Y5I7 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN16Q9Y5I7 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN16Q9Y5I7 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN16Q9Y5I7 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN16Q9Y5I7 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN16Q9Y5I7 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN16Q9Y5I7 MIR149-201ENST00000384879 89 ntBASIC17.24■□□□□ 0.35
CLDN16Q9Y5I7 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN16Q9Y5I7 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN16Q9Y5I7 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.24■□□□□ 0.35
CLDN16Q9Y5I7 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.24■□□□□ 0.35
CLDN16Q9Y5I7 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.24■□□□□ 0.35
CLDN16Q9Y5I7 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.24■□□□□ 0.35
CLDN16Q9Y5I7 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.24■□□□□ 0.35
CLDN16Q9Y5I7 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.24■□□□□ 0.35
CLDN16Q9Y5I7 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.24■□□□□ 0.35
CLDN16Q9Y5I7 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.24■□□□□ 0.35
CLDN16Q9Y5I7 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.24■□□□□ 0.35
CLDN16Q9Y5I7 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CLDN16Q9Y5I7 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.24■□□□□ 0.35
CLDN16Q9Y5I7 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN16Q9Y5I7 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.24■□□□□ 0.35
CLDN16Q9Y5I7 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.24■□□□□ 0.35
CLDN16Q9Y5I7 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CLDN16Q9Y5I7 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.24■□□□□ 0.35
CLDN16Q9Y5I7 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.23■□□□□ 0.35
CLDN16Q9Y5I7 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CLDN16Q9Y5I7 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.23■□□□□ 0.35
CLDN16Q9Y5I7 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CLDN16Q9Y5I7 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN16Q9Y5I7 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CLDN16Q9Y5I7 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN16Q9Y5I7 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN16Q9Y5I7 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN16Q9Y5I7 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN16Q9Y5I7 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.23■□□□□ 0.35
CLDN16Q9Y5I7 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN16Q9Y5I7 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN16Q9Y5I7 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.23■□□□□ 0.35
CLDN16Q9Y5I7 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN16Q9Y5I7 AL136038.4-201ENST00000603606 1261 ntBASIC17.23■□□□□ 0.35
CLDN16Q9Y5I7 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.23■□□□□ 0.35
CLDN16Q9Y5I7 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.23■□□□□ 0.35
CLDN16Q9Y5I7 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN16Q9Y5I7 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.23■□□□□ 0.35
CLDN16Q9Y5I7 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN16Q9Y5I7 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN16Q9Y5I7 AC009102.3-201ENST00000623118 1491 ntBASIC17.23■□□□□ 0.35
CLDN16Q9Y5I7 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN16Q9Y5I7 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN16Q9Y5I7 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN16Q9Y5I7 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN16Q9Y5I7 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CLDN16Q9Y5I7 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.22■□□□□ 0.35
CLDN16Q9Y5I7 LINC01311-201ENST00000565162 1445 ntBASIC17.22■□□□□ 0.35
CLDN16Q9Y5I7 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN16Q9Y5I7 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.22■□□□□ 0.35
CLDN16Q9Y5I7 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN16Q9Y5I7 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms