Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGA4Q9Y5G9 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGA4Q9Y5G9 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
PCDHGA4Q9Y5G9 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGA4Q9Y5G9 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
PCDHGA4Q9Y5G9 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGA4Q9Y5G9 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGA4Q9Y5G9 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHGA4Q9Y5G9 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGA4Q9Y5G9 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGA4Q9Y5G9 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHGA4Q9Y5G9 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.34■□□□□ 0.53
PCDHGA4Q9Y5G9 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
PCDHGA4Q9Y5G9 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.34■□□□□ 0.53
PCDHGA4Q9Y5G9 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGA4Q9Y5G9 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGA4Q9Y5G9 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.34■□□□□ 0.53
PCDHGA4Q9Y5G9 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGA4Q9Y5G9 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGA4Q9Y5G9 AL031133.1-201ENST00000406807 723 ntBASIC18.34■□□□□ 0.53
PCDHGA4Q9Y5G9 AL845331.1-201ENST00000424978 1190 ntBASIC18.34■□□□□ 0.53
PCDHGA4Q9Y5G9 TSPY21P-201ENST00000433481 731 ntBASIC18.34■□□□□ 0.53
PCDHGA4Q9Y5G9 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGA4Q9Y5G9 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.34■□□□□ 0.53
PCDHGA4Q9Y5G9 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PCDHGA4Q9Y5G9 AP000692.2-201ENST00000608391 879 ntBASIC18.34■□□□□ 0.53
PCDHGA4Q9Y5G9 AC022726.2-201ENST00000634673 547 ntBASIC18.34■□□□□ 0.53
PCDHGA4Q9Y5G9 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
PCDHGA4Q9Y5G9 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGA4Q9Y5G9 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
PCDHGA4Q9Y5G9 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGA4Q9Y5G9 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGA4Q9Y5G9 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGA4Q9Y5G9 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.34■□□□□ 0.53
PCDHGA4Q9Y5G9 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGA4Q9Y5G9 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGA4Q9Y5G9 AC012313.1-201ENST00000593393 3059 ntBASIC18.34■□□□□ 0.53
PCDHGA4Q9Y5G9 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHGA4Q9Y5G9 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHGA4Q9Y5G9 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
PCDHGA4Q9Y5G9 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
PCDHGA4Q9Y5G9 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.33■□□□□ 0.53
PCDHGA4Q9Y5G9 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHGA4Q9Y5G9 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHGA4Q9Y5G9 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHGA4Q9Y5G9 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.33■□□□□ 0.53
PCDHGA4Q9Y5G9 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHGA4Q9Y5G9 AC141586.3-201ENST00000562166 1838 ntBASIC18.33■□□□□ 0.53
PCDHGA4Q9Y5G9 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHGA4Q9Y5G9 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.33■□□□□ 0.53
PCDHGA4Q9Y5G9 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGA4Q9Y5G9 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGA4Q9Y5G9 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
PCDHGA4Q9Y5G9 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGA4Q9Y5G9 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGA4Q9Y5G9 KRT18P56-201ENST00000507275 550 ntBASIC18.33■□□□□ 0.52
PCDHGA4Q9Y5G9 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.33■□□□□ 0.52
PCDHGA4Q9Y5G9 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGA4Q9Y5G9 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.33■□□□□ 0.52
PCDHGA4Q9Y5G9 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.33■□□□□ 0.52
PCDHGA4Q9Y5G9 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.33■□□□□ 0.52
PCDHGA4Q9Y5G9 AC116562.4-202ENST00000641738 218 ntBASIC18.33■□□□□ 0.52
PCDHGA4Q9Y5G9 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.33■□□□□ 0.52
PCDHGA4Q9Y5G9 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
PCDHGA4Q9Y5G9 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
PCDHGA4Q9Y5G9 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGA4Q9Y5G9 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.33■□□□□ 0.52
PCDHGA4Q9Y5G9 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGA4Q9Y5G9 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
PCDHGA4Q9Y5G9 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGA4Q9Y5G9 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
PCDHGA4Q9Y5G9 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGA4Q9Y5G9 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
PCDHGA4Q9Y5G9 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA4Q9Y5G9 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA4Q9Y5G9 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PCDHGA4Q9Y5G9 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA4Q9Y5G9 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHGA4Q9Y5G9 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA4Q9Y5G9 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA4Q9Y5G9 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA4Q9Y5G9 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA4Q9Y5G9 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHGA4Q9Y5G9 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.32■□□□□ 0.52
PCDHGA4Q9Y5G9 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA4Q9Y5G9 TSPY23P-201ENST00000440136 739 ntBASIC18.32■□□□□ 0.52
PCDHGA4Q9Y5G9 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA4Q9Y5G9 FAM207BP-201ENST00000447172 505 ntBASIC18.32■□□□□ 0.52
PCDHGA4Q9Y5G9 AC092647.4-201ENST00000457211 535 ntBASIC18.32■□□□□ 0.52
PCDHGA4Q9Y5G9 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA4Q9Y5G9 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
PCDHGA4Q9Y5G9 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHGA4Q9Y5G9 AL138966.2-201ENST00000621997 464 ntBASIC18.32■□□□□ 0.52
PCDHGA4Q9Y5G9 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
PCDHGA4Q9Y5G9 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA4Q9Y5G9 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA4Q9Y5G9 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA4Q9Y5G9 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
PCDHGA4Q9Y5G9 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA4Q9Y5G9 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms