Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA9Q9Y5G4 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA9Q9Y5G4 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDHGA9Q9Y5G4 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA9Q9Y5G4 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA9Q9Y5G4 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.36■□□□□ 0.37
PCDHGA9Q9Y5G4 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.36■□□□□ 0.37
PCDHGA9Q9Y5G4 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA9Q9Y5G4 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDHGA9Q9Y5G4 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA9Q9Y5G4 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA9Q9Y5G4 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA9Q9Y5G4 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA9Q9Y5G4 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDHGA9Q9Y5G4 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA9Q9Y5G4 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDHGA9Q9Y5G4 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.35■□□□□ 0.37
PCDHGA9Q9Y5G4 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA9Q9Y5G4 MCCD1P1-208ENST00000445732 328 ntBASIC17.35■□□□□ 0.37
PCDHGA9Q9Y5G4 KRT8P26-201ENST00000534154 1276 ntBASIC17.35■□□□□ 0.37
PCDHGA9Q9Y5G4 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA9Q9Y5G4 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.35■□□□□ 0.37
PCDHGA9Q9Y5G4 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA9Q9Y5G4 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.35■□□□□ 0.37
PCDHGA9Q9Y5G4 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA9Q9Y5G4 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.35■□□□□ 0.37
PCDHGA9Q9Y5G4 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA9Q9Y5G4 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
PCDHGA9Q9Y5G4 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA9Q9Y5G4 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.35■□□□□ 0.37
PCDHGA9Q9Y5G4 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA9Q9Y5G4 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA9Q9Y5G4 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA9Q9Y5G4 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.35■□□□□ 0.37
PCDHGA9Q9Y5G4 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDHGA9Q9Y5G4 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDHGA9Q9Y5G4 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA9Q9Y5G4 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDHGA9Q9Y5G4 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDHGA9Q9Y5G4 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA9Q9Y5G4 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGA9Q9Y5G4 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGA9Q9Y5G4 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGA9Q9Y5G4 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGA9Q9Y5G4 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGA9Q9Y5G4 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.34■□□□□ 0.37
PCDHGA9Q9Y5G4 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGA9Q9Y5G4 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGA9Q9Y5G4 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
PCDHGA9Q9Y5G4 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGA9Q9Y5G4 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.34■□□□□ 0.37
PCDHGA9Q9Y5G4 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
PCDHGA9Q9Y5G4 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.34■□□□□ 0.37
PCDHGA9Q9Y5G4 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGA9Q9Y5G4 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.34■□□□□ 0.37
PCDHGA9Q9Y5G4 NUS1P1-201ENST00000446295 882 ntBASIC17.34■□□□□ 0.37
PCDHGA9Q9Y5G4 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.34■□□□□ 0.37
PCDHGA9Q9Y5G4 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGA9Q9Y5G4 AC036111.1-201ENST00000533973 1582 ntBASIC17.34■□□□□ 0.37
PCDHGA9Q9Y5G4 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.34■□□□□ 0.37
PCDHGA9Q9Y5G4 AC093525.10-201ENST00000625130 1569 ntBASIC17.34■□□□□ 0.37
PCDHGA9Q9Y5G4 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGA9Q9Y5G4 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.34■□□□□ 0.37
PCDHGA9Q9Y5G4 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
PCDHGA9Q9Y5G4 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
PCDHGA9Q9Y5G4 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGA9Q9Y5G4 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHGA9Q9Y5G4 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.33■□□□□ 0.37
PCDHGA9Q9Y5G4 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.33■□□□□ 0.37
PCDHGA9Q9Y5G4 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHGA9Q9Y5G4 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHGA9Q9Y5G4 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHGA9Q9Y5G4 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHGA9Q9Y5G4 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.33■□□□□ 0.37
PCDHGA9Q9Y5G4 AL162741.1-201ENST00000565563 1558 ntBASIC17.33■□□□□ 0.37
PCDHGA9Q9Y5G4 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGA9Q9Y5G4 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGA9Q9Y5G4 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.33■□□□□ 0.36
PCDHGA9Q9Y5G4 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGA9Q9Y5G4 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.33■□□□□ 0.36
PCDHGA9Q9Y5G4 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
PCDHGA9Q9Y5G4 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGA9Q9Y5G4 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.33■□□□□ 0.36
PCDHGA9Q9Y5G4 HLA-F-220ENST00000434407 884 ntBASIC17.33■□□□□ 0.36
PCDHGA9Q9Y5G4 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.33■□□□□ 0.36
PCDHGA9Q9Y5G4 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGA9Q9Y5G4 KRT17P6-201ENST00000453795 1220 ntBASIC17.33■□□□□ 0.36
PCDHGA9Q9Y5G4 SEC1P-202ENST00000473944 940 ntBASIC17.33■□□□□ 0.36
PCDHGA9Q9Y5G4 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.33■□□□□ 0.36
PCDHGA9Q9Y5G4 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.33■□□□□ 0.36
PCDHGA9Q9Y5G4 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.33■□□□□ 0.36
PCDHGA9Q9Y5G4 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
PCDHGA9Q9Y5G4 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.33■□□□□ 0.36
PCDHGA9Q9Y5G4 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.33■□□□□ 0.36
PCDHGA9Q9Y5G4 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGA9Q9Y5G4 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.33■□□□□ 0.36
PCDHGA9Q9Y5G4 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGA9Q9Y5G4 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.33■□□□□ 0.36
PCDHGA9Q9Y5G4 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGA9Q9Y5G4 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms