Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.03■□□□□ 0.32
PCDHGB1Q9Y5G3 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGB1Q9Y5G3 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGB1Q9Y5G3 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.03■□□□□ 0.32
PCDHGB1Q9Y5G3 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGB1Q9Y5G3 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDHGB1Q9Y5G3 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGB1Q9Y5G3 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGB1Q9Y5G3 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.02■□□□□ 0.32
PCDHGB1Q9Y5G3 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
PCDHGB1Q9Y5G3 AC080080.1-201ENST00000625121 2420 ntBASIC17.02■□□□□ 0.32
PCDHGB1Q9Y5G3 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.02■□□□□ 0.32
PCDHGB1Q9Y5G3 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGB1Q9Y5G3 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGB1Q9Y5G3 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGB1Q9Y5G3 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.02■□□□□ 0.32
PCDHGB1Q9Y5G3 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGB1Q9Y5G3 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGB1Q9Y5G3 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGB1Q9Y5G3 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGB1Q9Y5G3 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGB1Q9Y5G3 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGB1Q9Y5G3 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.02■□□□□ 0.32
PCDHGB1Q9Y5G3 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGB1Q9Y5G3 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.02■□□□□ 0.32
PCDHGB1Q9Y5G3 RPS2P52-201ENST00000469610 820 ntBASIC17.02■□□□□ 0.32
PCDHGB1Q9Y5G3 AF201337.1-201ENST00000520239 748 ntBASIC17.02■□□□□ 0.32
PCDHGB1Q9Y5G3 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
PCDHGB1Q9Y5G3 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.02■□□□□ 0.32
PCDHGB1Q9Y5G3 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGB1Q9Y5G3 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
PCDHGB1Q9Y5G3 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCDHGB1Q9Y5G3 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCDHGB1Q9Y5G3 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCDHGB1Q9Y5G3 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
PCDHGB1Q9Y5G3 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.02■□□□□ 0.31
PCDHGB1Q9Y5G3 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.02■□□□□ 0.31
PCDHGB1Q9Y5G3 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCDHGB1Q9Y5G3 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PCDHGB1Q9Y5G3 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
PCDHGB1Q9Y5G3 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGB1Q9Y5G3 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGB1Q9Y5G3 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
PCDHGB1Q9Y5G3 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGB1Q9Y5G3 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.01■□□□□ 0.31
PCDHGB1Q9Y5G3 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
PCDHGB1Q9Y5G3 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
PCDHGB1Q9Y5G3 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGB1Q9Y5G3 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGB1Q9Y5G3 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHGB1Q9Y5G3 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.01■□□□□ 0.31
PCDHGB1Q9Y5G3 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
PCDHGB1Q9Y5G3 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.01■□□□□ 0.31
PCDHGB1Q9Y5G3 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGB1Q9Y5G3 KRT18P29-201ENST00000397031 1267 ntBASIC17.01■□□□□ 0.31
PCDHGB1Q9Y5G3 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.01■□□□□ 0.31
PCDHGB1Q9Y5G3 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.01■□□□□ 0.31
PCDHGB1Q9Y5G3 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.01■□□□□ 0.31
PCDHGB1Q9Y5G3 AC105036.2-201ENST00000569468 176 ntBASIC17.01■□□□□ 0.31
PCDHGB1Q9Y5G3 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGB1Q9Y5G3 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGB1Q9Y5G3 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGB1Q9Y5G3 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
PCDHGB1Q9Y5G3 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHGB1Q9Y5G3 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHGB1Q9Y5G3 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGB1Q9Y5G3 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHGB1Q9Y5G3 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGB1Q9Y5G3 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
PCDHGB1Q9Y5G3 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
PCDHGB1Q9Y5G3 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
PCDHGB1Q9Y5G3 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGB1Q9Y5G3 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGB1Q9Y5G3 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGB1Q9Y5G3 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGB1Q9Y5G3 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17■□□□□ 0.31
PCDHGB1Q9Y5G3 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGB1Q9Y5G3 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGB1Q9Y5G3 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGB1Q9Y5G3 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGB1Q9Y5G3 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17■□□□□ 0.31
PCDHGB1Q9Y5G3 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGB1Q9Y5G3 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGB1Q9Y5G3 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17■□□□□ 0.31
PCDHGB1Q9Y5G3 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDHGB1Q9Y5G3 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
PCDHGB1Q9Y5G3 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
PCDHGB1Q9Y5G3 TUBB8P6-201ENST00000436895 1288 ntBASIC17■□□□□ 0.31
PCDHGB1Q9Y5G3 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDHGB1Q9Y5G3 NME6-213ENST00000451657 871 ntTSL 2 BASIC17■□□□□ 0.31
PCDHGB1Q9Y5G3 KRT18P16-201ENST00000510337 1294 ntBASIC17■□□□□ 0.31
PCDHGB1Q9Y5G3 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGB1Q9Y5G3 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17■□□□□ 0.31
PCDHGB1Q9Y5G3 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
PCDHGB1Q9Y5G3 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17■□□□□ 0.31
PCDHGB1Q9Y5G3 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17■□□□□ 0.31
PCDHGB1Q9Y5G3 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17■□□□□ 0.31
PCDHGB1Q9Y5G3 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PCDHGB1Q9Y5G3 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17■□□□□ 0.31
PCDHGB1Q9Y5G3 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms