Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.19■□□□□ 0.5
PCDHB3Q9Y5E6 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB3Q9Y5E6 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
PCDHB3Q9Y5E6 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB3Q9Y5E6 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB3Q9Y5E6 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PCDHB3Q9Y5E6 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB3Q9Y5E6 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB3Q9Y5E6 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB3Q9Y5E6 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB3Q9Y5E6 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDHB3Q9Y5E6 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.19■□□□□ 0.5
PCDHB3Q9Y5E6 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
PCDHB3Q9Y5E6 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
PCDHB3Q9Y5E6 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.19■□□□□ 0.5
PCDHB3Q9Y5E6 AC063952.2-201ENST00000498792 1227 ntBASIC18.19■□□□□ 0.5
PCDHB3Q9Y5E6 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.19■□□□□ 0.5
PCDHB3Q9Y5E6 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.19■□□□□ 0.5
PCDHB3Q9Y5E6 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDHB3Q9Y5E6 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.19■□□□□ 0.5
PCDHB3Q9Y5E6 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
PCDHB3Q9Y5E6 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB3Q9Y5E6 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB3Q9Y5E6 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PCDHB3Q9Y5E6 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB3Q9Y5E6 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB3Q9Y5E6 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.19■□□□□ 0.5
PCDHB3Q9Y5E6 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.19■□□□□ 0.5
PCDHB3Q9Y5E6 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB3Q9Y5E6 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB3Q9Y5E6 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.19■□□□□ 0.5
PCDHB3Q9Y5E6 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PCDHB3Q9Y5E6 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB3Q9Y5E6 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB3Q9Y5E6 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB3Q9Y5E6 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
PCDHB3Q9Y5E6 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB3Q9Y5E6 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB3Q9Y5E6 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB3Q9Y5E6 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB3Q9Y5E6 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
PCDHB3Q9Y5E6 KRT8P11-201ENST00000409686 1436 ntBASIC18.18■□□□□ 0.5
PCDHB3Q9Y5E6 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.18■□□□□ 0.5
PCDHB3Q9Y5E6 AC104417.2-201ENST00000562989 1793 ntBASIC18.18■□□□□ 0.5
PCDHB3Q9Y5E6 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB3Q9Y5E6 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB3Q9Y5E6 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB3Q9Y5E6 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB3Q9Y5E6 RNF152P1-201ENST00000397754 604 ntBASIC18.18■□□□□ 0.5
PCDHB3Q9Y5E6 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.18■□□□□ 0.5
PCDHB3Q9Y5E6 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB3Q9Y5E6 AC092647.4-201ENST00000457211 535 ntBASIC18.18■□□□□ 0.5
PCDHB3Q9Y5E6 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.18■□□□□ 0.5
PCDHB3Q9Y5E6 AC244517.3-201ENST00000616254 1235 ntBASIC18.18■□□□□ 0.5
PCDHB3Q9Y5E6 AL138966.2-201ENST00000621997 464 ntBASIC18.18■□□□□ 0.5
PCDHB3Q9Y5E6 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB3Q9Y5E6 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.18■□□□□ 0.5
PCDHB3Q9Y5E6 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB3Q9Y5E6 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB3Q9Y5E6 IRX1P1-201ENST00000438849 1838 ntBASIC18.18■□□□□ 0.5
PCDHB3Q9Y5E6 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB3Q9Y5E6 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB3Q9Y5E6 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
PCDHB3Q9Y5E6 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.18■□□□□ 0.5
PCDHB3Q9Y5E6 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDHB3Q9Y5E6 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB3Q9Y5E6 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB3Q9Y5E6 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
PCDHB3Q9Y5E6 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDHB3Q9Y5E6 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB3Q9Y5E6 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDHB3Q9Y5E6 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.17■□□□□ 0.5
PCDHB3Q9Y5E6 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
PCDHB3Q9Y5E6 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDHB3Q9Y5E6 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.17■□□□□ 0.5
PCDHB3Q9Y5E6 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB3Q9Y5E6 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.17■□□□□ 0.5
PCDHB3Q9Y5E6 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB3Q9Y5E6 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB3Q9Y5E6 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB3Q9Y5E6 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.17■□□□□ 0.5
PCDHB3Q9Y5E6 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB3Q9Y5E6 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.17■□□□□ 0.5
PCDHB3Q9Y5E6 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
PCDHB3Q9Y5E6 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB3Q9Y5E6 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB3Q9Y5E6 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.17■□□□□ 0.5
PCDHB3Q9Y5E6 AL589935.2-201ENST00000616471 1231 ntBASIC18.17■□□□□ 0.5
PCDHB3Q9Y5E6 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB3Q9Y5E6 AL354751.1-201ENST00000412768 1863 ntBASIC18.17■□□□□ 0.5
PCDHB3Q9Y5E6 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDHB3Q9Y5E6 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.17■□□□□ 0.5
PCDHB3Q9Y5E6 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB3Q9Y5E6 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB3Q9Y5E6 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
PCDHB3Q9Y5E6 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB3Q9Y5E6 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB3Q9Y5E6 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.17■□□□□ 0.5
PCDHB3Q9Y5E6 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB3Q9Y5E6 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms