Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CHMP2BQ9UQN3 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP2BQ9UQN3 BCL2-203ENST00000589955 5011 ntBASIC18.93■□□□□ 0.62
CHMP2BQ9UQN3 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP2BQ9UQN3 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP2BQ9UQN3 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.93■□□□□ 0.62
CHMP2BQ9UQN3 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.93■□□□□ 0.62
CHMP2BQ9UQN3 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
CHMP2BQ9UQN3 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.93■□□□□ 0.62
CHMP2BQ9UQN3 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.93■□□□□ 0.62
CHMP2BQ9UQN3 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.93■□□□□ 0.62
CHMP2BQ9UQN3 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP2BQ9UQN3 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.93■□□□□ 0.62
CHMP2BQ9UQN3 RCC2P3-201ENST00000418112 1537 ntBASIC18.93■□□□□ 0.62
CHMP2BQ9UQN3 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP2BQ9UQN3 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.93■□□□□ 0.62
CHMP2BQ9UQN3 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
CHMP2BQ9UQN3 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP2BQ9UQN3 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.93■□□□□ 0.62
CHMP2BQ9UQN3 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.93■□□□□ 0.62
CHMP2BQ9UQN3 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.93■□□□□ 0.62
CHMP2BQ9UQN3 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CHMP2BQ9UQN3 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP2BQ9UQN3 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP2BQ9UQN3 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP2BQ9UQN3 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP2BQ9UQN3 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
CHMP2BQ9UQN3 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP2BQ9UQN3 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP2BQ9UQN3 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.92■□□□□ 0.62
CHMP2BQ9UQN3 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP2BQ9UQN3 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.92■□□□□ 0.62
CHMP2BQ9UQN3 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP2BQ9UQN3 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.92■□□□□ 0.62
CHMP2BQ9UQN3 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.92■□□□□ 0.62
CHMP2BQ9UQN3 AC004951.3-201ENST00000418645 1148 ntBASIC18.92■□□□□ 0.62
CHMP2BQ9UQN3 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP2BQ9UQN3 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.92■□□□□ 0.62
CHMP2BQ9UQN3 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.92■□□□□ 0.62
CHMP2BQ9UQN3 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.92■□□□□ 0.62
CHMP2BQ9UQN3 AC006058.3-201ENST00000606217 1069 ntBASIC18.92■□□□□ 0.62
CHMP2BQ9UQN3 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CHMP2BQ9UQN3 MYC-208ENST00000641036 567 ntBASIC18.92■□□□□ 0.62
CHMP2BQ9UQN3 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP2BQ9UQN3 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.92■□□□□ 0.62
CHMP2BQ9UQN3 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP2BQ9UQN3 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.92■□□□□ 0.62
CHMP2BQ9UQN3 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP2BQ9UQN3 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.92■□□□□ 0.62
CHMP2BQ9UQN3 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHMP2BQ9UQN3 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CHMP2BQ9UQN3 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.92■□□□□ 0.62
CHMP2BQ9UQN3 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.92■□□□□ 0.62
CHMP2BQ9UQN3 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.92■□□□□ 0.62
CHMP2BQ9UQN3 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.92■□□□□ 0.62
CHMP2BQ9UQN3 KRT8P45-201ENST00000414328 1447 ntBASIC18.91■□□□□ 0.62
CHMP2BQ9UQN3 AC112777.1-201ENST00000540175 1423 ntBASIC18.91■□□□□ 0.62
CHMP2BQ9UQN3 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP2BQ9UQN3 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP2BQ9UQN3 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.91■□□□□ 0.62
CHMP2BQ9UQN3 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
CHMP2BQ9UQN3 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.91■□□□□ 0.62
CHMP2BQ9UQN3 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP2BQ9UQN3 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP2BQ9UQN3 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.91■□□□□ 0.62
CHMP2BQ9UQN3 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP2BQ9UQN3 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP2BQ9UQN3 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CHMP2BQ9UQN3 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.91■□□□□ 0.62
CHMP2BQ9UQN3 KSR1P1-201ENST00000446298 240 ntBASIC18.91■□□□□ 0.62
CHMP2BQ9UQN3 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP2BQ9UQN3 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.91■□□□□ 0.62
CHMP2BQ9UQN3 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP2BQ9UQN3 AL353708.3-201ENST00000610272 989 ntBASIC18.91■□□□□ 0.62
CHMP2BQ9UQN3 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.91■□□□□ 0.62
CHMP2BQ9UQN3 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP2BQ9UQN3 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP2BQ9UQN3 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.91■□□□□ 0.62
CHMP2BQ9UQN3 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CHMP2BQ9UQN3 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP2BQ9UQN3 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.91■□□□□ 0.62
CHMP2BQ9UQN3 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP2BQ9UQN3 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.91■□□□□ 0.62
CHMP2BQ9UQN3 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.91■□□□□ 0.62
CHMP2BQ9UQN3 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CHMP2BQ9UQN3 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.9■□□□□ 0.62
CHMP2BQ9UQN3 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.9■□□□□ 0.62
CHMP2BQ9UQN3 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.9■□□□□ 0.62
CHMP2BQ9UQN3 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
CHMP2BQ9UQN3 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP2BQ9UQN3 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.9■□□□□ 0.62
CHMP2BQ9UQN3 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP2BQ9UQN3 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP2BQ9UQN3 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP2BQ9UQN3 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP2BQ9UQN3 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP2BQ9UQN3 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP2BQ9UQN3 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.9■□□□□ 0.62
CHMP2BQ9UQN3 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHMP2BQ9UQN3 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms