Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NPIPA1Q9UND3 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.14■□□□□ 0.33
NPIPA1Q9UND3 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NPIPA1Q9UND3 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NPIPA1Q9UND3 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NPIPA1Q9UND3 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
NPIPA1Q9UND3 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NPIPA1Q9UND3 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NPIPA1Q9UND3 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.14■□□□□ 0.33
NPIPA1Q9UND3 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
NPIPA1Q9UND3 CR769767.2-201ENST00000622735 460 ntBASIC17.14■□□□□ 0.33
NPIPA1Q9UND3 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
NPIPA1Q9UND3 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NPIPA1Q9UND3 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
NPIPA1Q9UND3 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
NPIPA1Q9UND3 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NPIPA1Q9UND3 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
NPIPA1Q9UND3 AC005332.1-201ENST00000577698 1310 ntBASIC17.14■□□□□ 0.33
NPIPA1Q9UND3 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.14■□□□□ 0.33
NPIPA1Q9UND3 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NPIPA1Q9UND3 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.14■□□□□ 0.33
NPIPA1Q9UND3 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
NPIPA1Q9UND3 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
NPIPA1Q9UND3 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NPIPA1Q9UND3 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPIPA1Q9UND3 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPIPA1Q9UND3 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.13■□□□□ 0.33
NPIPA1Q9UND3 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
NPIPA1Q9UND3 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPIPA1Q9UND3 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.13■□□□□ 0.33
NPIPA1Q9UND3 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPIPA1Q9UND3 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NPIPA1Q9UND3 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPIPA1Q9UND3 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.13■□□□□ 0.33
NPIPA1Q9UND3 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NPIPA1Q9UND3 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPIPA1Q9UND3 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPIPA1Q9UND3 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NPIPA1Q9UND3 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPIPA1Q9UND3 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.13■□□□□ 0.33
NPIPA1Q9UND3 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
NPIPA1Q9UND3 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NPIPA1Q9UND3 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.13■□□□□ 0.33
NPIPA1Q9UND3 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPIPA1Q9UND3 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.13■□□□□ 0.33
NPIPA1Q9UND3 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NPIPA1Q9UND3 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.13■□□□□ 0.33
NPIPA1Q9UND3 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPIPA1Q9UND3 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.13■□□□□ 0.33
NPIPA1Q9UND3 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPIPA1Q9UND3 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NPIPA1Q9UND3 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NPIPA1Q9UND3 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NPIPA1Q9UND3 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
NPIPA1Q9UND3 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NPIPA1Q9UND3 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NPIPA1Q9UND3 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NPIPA1Q9UND3 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NPIPA1Q9UND3 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.12■□□□□ 0.33
NPIPA1Q9UND3 FP475955.4-201ENST00000623131 1990 ntBASIC17.12■□□□□ 0.33
NPIPA1Q9UND3 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NPIPA1Q9UND3 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NPIPA1Q9UND3 STARP1-201ENST00000397973 869 ntBASIC17.12■□□□□ 0.33
NPIPA1Q9UND3 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.12■□□□□ 0.33
NPIPA1Q9UND3 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NPIPA1Q9UND3 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NPIPA1Q9UND3 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
NPIPA1Q9UND3 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NPIPA1Q9UND3 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.12■□□□□ 0.33
NPIPA1Q9UND3 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
NPIPA1Q9UND3 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NPIPA1Q9UND3 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
NPIPA1Q9UND3 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NPIPA1Q9UND3 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NPIPA1Q9UND3 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NPIPA1Q9UND3 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
NPIPA1Q9UND3 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NPIPA1Q9UND3 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.12■□□□□ 0.33
NPIPA1Q9UND3 IRX1P1-201ENST00000438849 1838 ntBASIC17.12■□□□□ 0.33
NPIPA1Q9UND3 AL049812.1-201ENST00000432563 2267 ntBASIC17.12■□□□□ 0.33
NPIPA1Q9UND3 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NPIPA1Q9UND3 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NPIPA1Q9UND3 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
NPIPA1Q9UND3 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.12■□□□□ 0.33
NPIPA1Q9UND3 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NPIPA1Q9UND3 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NPIPA1Q9UND3 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPIPA1Q9UND3 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.11■□□□□ 0.33
NPIPA1Q9UND3 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.11■□□□□ 0.33
NPIPA1Q9UND3 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.11■□□□□ 0.33
NPIPA1Q9UND3 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
NPIPA1Q9UND3 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.11■□□□□ 0.33
NPIPA1Q9UND3 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPIPA1Q9UND3 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NPIPA1Q9UND3 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPIPA1Q9UND3 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.11■□□□□ 0.33
NPIPA1Q9UND3 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
NPIPA1Q9UND3 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
NPIPA1Q9UND3 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
NPIPA1Q9UND3 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms