Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.62■□□□□ 0.73
CDH9Q9ULB4 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.62■□□□□ 0.73
CDH9Q9ULB4 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CDH9Q9ULB4 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CDH9Q9ULB4 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDH9Q9ULB4 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.62■□□□□ 0.73
CDH9Q9ULB4 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH9Q9ULB4 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH9Q9ULB4 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CDH9Q9ULB4 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDH9Q9ULB4 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.61■□□□□ 0.73
CDH9Q9ULB4 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH9Q9ULB4 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.61■□□□□ 0.73
CDH9Q9ULB4 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH9Q9ULB4 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.61■□□□□ 0.73
CDH9Q9ULB4 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH9Q9ULB4 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.61■□□□□ 0.73
CDH9Q9ULB4 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CDH9Q9ULB4 AL645929.1-201ENST00000420084 975 ntBASIC19.61■□□□□ 0.73
CDH9Q9ULB4 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.61■□□□□ 0.73
CDH9Q9ULB4 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.61■□□□□ 0.73
CDH9Q9ULB4 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CDH9Q9ULB4 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.61■□□□□ 0.73
CDH9Q9ULB4 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.61■□□□□ 0.73
CDH9Q9ULB4 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH9Q9ULB4 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.61■□□□□ 0.73
CDH9Q9ULB4 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDH9Q9ULB4 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH9Q9ULB4 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH9Q9ULB4 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDH9Q9ULB4 MYLKP1-201ENST00000509077 1580 ntBASIC19.61■□□□□ 0.73
CDH9Q9ULB4 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CDH9Q9ULB4 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDH9Q9ULB4 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.6■□□□□ 0.73
CDH9Q9ULB4 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CDH9Q9ULB4 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDH9Q9ULB4 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.6■□□□□ 0.73
CDH9Q9ULB4 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDH9Q9ULB4 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.6■□□□□ 0.73
CDH9Q9ULB4 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.6■□□□□ 0.73
CDH9Q9ULB4 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.6■□□□□ 0.73
CDH9Q9ULB4 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.6■□□□□ 0.73
CDH9Q9ULB4 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
CDH9Q9ULB4 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.6■□□□□ 0.73
CDH9Q9ULB4 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CDH9Q9ULB4 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.6■□□□□ 0.73
CDH9Q9ULB4 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDH9Q9ULB4 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDH9Q9ULB4 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDH9Q9ULB4 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
CDH9Q9ULB4 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDH9Q9ULB4 ANO7L1-203ENST00000602586 1720 ntBASIC19.59■□□□□ 0.73
CDH9Q9ULB4 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDH9Q9ULB4 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDH9Q9ULB4 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.59■□□□□ 0.73
CDH9Q9ULB4 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDH9Q9ULB4 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.59■□□□□ 0.73
CDH9Q9ULB4 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDH9Q9ULB4 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDH9Q9ULB4 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDH9Q9ULB4 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDH9Q9ULB4 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDH9Q9ULB4 MIR662-201ENST00000384847 95 ntBASIC19.59■□□□□ 0.73
CDH9Q9ULB4 MIR149-201ENST00000384879 89 ntBASIC19.59■□□□□ 0.73
CDH9Q9ULB4 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.59■□□□□ 0.73
CDH9Q9ULB4 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.59■□□□□ 0.73
CDH9Q9ULB4 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDH9Q9ULB4 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.59■□□□□ 0.73
CDH9Q9ULB4 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.59■□□□□ 0.73
CDH9Q9ULB4 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.59■□□□□ 0.73
CDH9Q9ULB4 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.59■□□□□ 0.73
CDH9Q9ULB4 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDH9Q9ULB4 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.59■□□□□ 0.73
CDH9Q9ULB4 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDH9Q9ULB4 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDH9Q9ULB4 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDH9Q9ULB4 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.59■□□□□ 0.73
CDH9Q9ULB4 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDH9Q9ULB4 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDH9Q9ULB4 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDH9Q9ULB4 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.58■□□□□ 0.73
CDH9Q9ULB4 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDH9Q9ULB4 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.58■□□□□ 0.73
CDH9Q9ULB4 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
CDH9Q9ULB4 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDH9Q9ULB4 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDH9Q9ULB4 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.58■□□□□ 0.72
CDH9Q9ULB4 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.58■□□□□ 0.72
CDH9Q9ULB4 UPK3BP1-201ENST00000428678 509 ntBASIC19.58■□□□□ 0.72
CDH9Q9ULB4 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CDH9Q9ULB4 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.58■□□□□ 0.72
CDH9Q9ULB4 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.58■□□□□ 0.72
CDH9Q9ULB4 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.58■□□□□ 0.72
CDH9Q9ULB4 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.58■□□□□ 0.72
CDH9Q9ULB4 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDH9Q9ULB4 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
CDH9Q9ULB4 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.58■□□□□ 0.72
CDH9Q9ULB4 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CDH9Q9ULB4 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.58■□□□□ 0.72
CDH9Q9ULB4 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms