Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTSFQ9UBX1 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CTSFQ9UBX1 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTSFQ9UBX1 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.48■□□□□ 0.39
CTSFQ9UBX1 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTSFQ9UBX1 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CTSFQ9UBX1 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CTSFQ9UBX1 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.48■□□□□ 0.39
CTSFQ9UBX1 AL645929.1-201ENST00000420084 975 ntBASIC17.48■□□□□ 0.39
CTSFQ9UBX1 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CTSFQ9UBX1 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.48■□□□□ 0.39
CTSFQ9UBX1 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.48■□□□□ 0.39
CTSFQ9UBX1 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTSFQ9UBX1 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.48■□□□□ 0.39
CTSFQ9UBX1 AC093458.2-201ENST00000623150 629 ntBASIC17.48■□□□□ 0.39
CTSFQ9UBX1 AC083906.6-201ENST00000641366 219 ntBASIC17.48■□□□□ 0.39
CTSFQ9UBX1 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.48■□□□□ 0.39
CTSFQ9UBX1 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CTSFQ9UBX1 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTSFQ9UBX1 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTSFQ9UBX1 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CTSFQ9UBX1 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTSFQ9UBX1 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CTSFQ9UBX1 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
CTSFQ9UBX1 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.48■□□□□ 0.39
CTSFQ9UBX1 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTSFQ9UBX1 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.48■□□□□ 0.39
CTSFQ9UBX1 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTSFQ9UBX1 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.47■□□□□ 0.39
CTSFQ9UBX1 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.47■□□□□ 0.39
CTSFQ9UBX1 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTSFQ9UBX1 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.47■□□□□ 0.39
CTSFQ9UBX1 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CTSFQ9UBX1 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTSFQ9UBX1 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CTSFQ9UBX1 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTSFQ9UBX1 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.47■□□□□ 0.39
CTSFQ9UBX1 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTSFQ9UBX1 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.47■□□□□ 0.39
CTSFQ9UBX1 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.47■□□□□ 0.39
CTSFQ9UBX1 AL136038.4-201ENST00000603606 1261 ntBASIC17.47■□□□□ 0.39
CTSFQ9UBX1 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.47■□□□□ 0.39
CTSFQ9UBX1 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CTSFQ9UBX1 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTSFQ9UBX1 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTSFQ9UBX1 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTSFQ9UBX1 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTSFQ9UBX1 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.47■□□□□ 0.39
CTSFQ9UBX1 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CTSFQ9UBX1 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.47■□□□□ 0.39
CTSFQ9UBX1 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTSFQ9UBX1 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CTSFQ9UBX1 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTSFQ9UBX1 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTSFQ9UBX1 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CTSFQ9UBX1 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTSFQ9UBX1 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CTSFQ9UBX1 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTSFQ9UBX1 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTSFQ9UBX1 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.46■□□□□ 0.39
CTSFQ9UBX1 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTSFQ9UBX1 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTSFQ9UBX1 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CTSFQ9UBX1 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CTSFQ9UBX1 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CTSFQ9UBX1 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTSFQ9UBX1 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.46■□□□□ 0.39
CTSFQ9UBX1 AC087289.5-201ENST00000586076 3175 ntBASIC17.46■□□□□ 0.39
CTSFQ9UBX1 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTSFQ9UBX1 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTSFQ9UBX1 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTSFQ9UBX1 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTSFQ9UBX1 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CTSFQ9UBX1 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CTSFQ9UBX1 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.46■□□□□ 0.39
CTSFQ9UBX1 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.46■□□□□ 0.39
CTSFQ9UBX1 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.46■□□□□ 0.39
CTSFQ9UBX1 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.46■□□□□ 0.39
CTSFQ9UBX1 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.46■□□□□ 0.39
CTSFQ9UBX1 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
CTSFQ9UBX1 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.46■□□□□ 0.39
CTSFQ9UBX1 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.46■□□□□ 0.39
CTSFQ9UBX1 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CTSFQ9UBX1 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CTSFQ9UBX1 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CTSFQ9UBX1 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CTSFQ9UBX1 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
CTSFQ9UBX1 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.45■□□□□ 0.38
CTSFQ9UBX1 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTSFQ9UBX1 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTSFQ9UBX1 AL391807.1-203ENST00000604392 2365 ntBASIC17.45■□□□□ 0.38
CTSFQ9UBX1 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTSFQ9UBX1 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CTSFQ9UBX1 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.45■□□□□ 0.38
CTSFQ9UBX1 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.45■□□□□ 0.38
CTSFQ9UBX1 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTSFQ9UBX1 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
CTSFQ9UBX1 HLA-F-220ENST00000434407 884 ntBASIC17.45■□□□□ 0.38
CTSFQ9UBX1 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CTSFQ9UBX1 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms