Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRFN1Q9P244 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
LRFN1Q9P244 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRFN1Q9P244 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.04■□□□□ 0.32
LRFN1Q9P244 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.04■□□□□ 0.32
LRFN1Q9P244 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRFN1Q9P244 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRFN1Q9P244 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
LRFN1Q9P244 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.03■□□□□ 0.32
LRFN1Q9P244 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRFN1Q9P244 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LRFN1Q9P244 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRFN1Q9P244 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LRFN1Q9P244 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRFN1Q9P244 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
LRFN1Q9P244 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRFN1Q9P244 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.03■□□□□ 0.32
LRFN1Q9P244 HLA-F-220ENST00000434407 884 ntBASIC17.03■□□□□ 0.32
LRFN1Q9P244 HCG4P8-203ENST00000443049 980 ntBASIC17.03■□□□□ 0.32
LRFN1Q9P244 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.03■□□□□ 0.32
LRFN1Q9P244 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.03■□□□□ 0.32
LRFN1Q9P244 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.03■□□□□ 0.32
LRFN1Q9P244 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
LRFN1Q9P244 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRFN1Q9P244 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRFN1Q9P244 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.03■□□□□ 0.32
LRFN1Q9P244 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.03■□□□□ 0.32
LRFN1Q9P244 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.03■□□□□ 0.32
LRFN1Q9P244 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRFN1Q9P244 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
LRFN1Q9P244 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRFN1Q9P244 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRFN1Q9P244 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
LRFN1Q9P244 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
LRFN1Q9P244 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.03■□□□□ 0.32
LRFN1Q9P244 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LRFN1Q9P244 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRFN1Q9P244 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.02■□□□□ 0.32
LRFN1Q9P244 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LRFN1Q9P244 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.32
LRFN1Q9P244 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LRFN1Q9P244 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.02■□□□□ 0.32
LRFN1Q9P244 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LRFN1Q9P244 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.02■□□□□ 0.32
LRFN1Q9P244 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
LRFN1Q9P244 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LRFN1Q9P244 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LRFN1Q9P244 HEIH-201ENST00000623091 1652 ntBASIC17.02■□□□□ 0.32
LRFN1Q9P244 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.02■□□□□ 0.32
LRFN1Q9P244 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
LRFN1Q9P244 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
LRFN1Q9P244 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.02■□□□□ 0.32
LRFN1Q9P244 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.02■□□□□ 0.32
LRFN1Q9P244 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.02■□□□□ 0.32
LRFN1Q9P244 AC011498.5-201ENST00000592027 486 ntBASIC17.02■□□□□ 0.32
LRFN1Q9P244 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
LRFN1Q9P244 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.02■□□□□ 0.31
LRFN1Q9P244 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.02■□□□□ 0.31
LRFN1Q9P244 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
LRFN1Q9P244 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
LRFN1Q9P244 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
LRFN1Q9P244 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.02■□□□□ 0.31
LRFN1Q9P244 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LRFN1Q9P244 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRFN1Q9P244 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
LRFN1Q9P244 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRFN1Q9P244 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LRFN1Q9P244 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
LRFN1Q9P244 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LRFN1Q9P244 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRFN1Q9P244 AL161938.1-201ENST00000569833 2180 ntBASIC17.01■□□□□ 0.31
LRFN1Q9P244 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LRFN1Q9P244 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.01■□□□□ 0.31
LRFN1Q9P244 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRFN1Q9P244 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.01■□□□□ 0.31
LRFN1Q9P244 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LRFN1Q9P244 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRFN1Q9P244 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRFN1Q9P244 AL162741.1-201ENST00000565563 1558 ntBASIC17.01■□□□□ 0.31
LRFN1Q9P244 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
LRFN1Q9P244 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
LRFN1Q9P244 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.01■□□□□ 0.31
LRFN1Q9P244 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.01■□□□□ 0.31
LRFN1Q9P244 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.01■□□□□ 0.31
LRFN1Q9P244 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LRFN1Q9P244 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.01■□□□□ 0.31
LRFN1Q9P244 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17■□□□□ 0.31
LRFN1Q9P244 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17■□□□□ 0.31
LRFN1Q9P244 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRFN1Q9P244 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRFN1Q9P244 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRFN1Q9P244 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
LRFN1Q9P244 Z98044.1-201ENST00000632503 1764 ntBASIC17■□□□□ 0.31
LRFN1Q9P244 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17■□□□□ 0.31
LRFN1Q9P244 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRFN1Q9P244 AC120498.9-201ENST00000339021 3867 ntBASIC17■□□□□ 0.31
LRFN1Q9P244 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
LRFN1Q9P244 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRFN1Q9P244 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
LRFN1Q9P244 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms