Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HACD3Q9P035 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HACD3Q9P035 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HACD3Q9P035 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.79■□□□□ 0.6
HACD3Q9P035 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HACD3Q9P035 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HACD3Q9P035 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
HACD3Q9P035 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.79■□□□□ 0.6
HACD3Q9P035 AC087499.1-201ENST00000418141 1075 ntBASIC18.79■□□□□ 0.6
HACD3Q9P035 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HACD3Q9P035 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.79■□□□□ 0.6
HACD3Q9P035 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.79■□□□□ 0.6
HACD3Q9P035 MIR3180-5-201ENST00000583743 153 ntBASIC18.79■□□□□ 0.6
HACD3Q9P035 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
HACD3Q9P035 AC073912.3-201ENST00000624414 853 ntBASIC18.79■□□□□ 0.6
HACD3Q9P035 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HACD3Q9P035 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HACD3Q9P035 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
HACD3Q9P035 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.79■□□□□ 0.6
HACD3Q9P035 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HACD3Q9P035 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HACD3Q9P035 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HACD3Q9P035 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.78■□□□□ 0.6
HACD3Q9P035 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.78■□□□□ 0.6
HACD3Q9P035 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HACD3Q9P035 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.78■□□□□ 0.6
HACD3Q9P035 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HACD3Q9P035 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HACD3Q9P035 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HACD3Q9P035 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.78■□□□□ 0.6
HACD3Q9P035 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.78■□□□□ 0.6
HACD3Q9P035 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HACD3Q9P035 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.78■□□□□ 0.6
HACD3Q9P035 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.78■□□□□ 0.6
HACD3Q9P035 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.78■□□□□ 0.6
HACD3Q9P035 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.78■□□□□ 0.6
HACD3Q9P035 AL512604.3-201ENST00000569583 964 ntBASIC18.78■□□□□ 0.6
HACD3Q9P035 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.78■□□□□ 0.6
HACD3Q9P035 MYC-208ENST00000641036 567 ntBASIC18.78■□□□□ 0.6
HACD3Q9P035 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
HACD3Q9P035 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.78■□□□□ 0.6
HACD3Q9P035 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
HACD3Q9P035 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HACD3Q9P035 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.78■□□□□ 0.6
HACD3Q9P035 LINC01568-207ENST00000641790 1380 ntBASIC18.78■□□□□ 0.6
HACD3Q9P035 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HACD3Q9P035 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HACD3Q9P035 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
HACD3Q9P035 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
HACD3Q9P035 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
HACD3Q9P035 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HACD3Q9P035 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HACD3Q9P035 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HACD3Q9P035 ANO7L1-203ENST00000602586 1720 ntBASIC18.77■□□□□ 0.6
HACD3Q9P035 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HACD3Q9P035 KRT18P22-201ENST00000402024 1347 ntBASIC18.77■□□□□ 0.6
HACD3Q9P035 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
HACD3Q9P035 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
HACD3Q9P035 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HACD3Q9P035 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.77■□□□□ 0.6
HACD3Q9P035 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HACD3Q9P035 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
HACD3Q9P035 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HACD3Q9P035 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
HACD3Q9P035 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HACD3Q9P035 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HACD3Q9P035 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HACD3Q9P035 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HACD3Q9P035 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.77■□□□□ 0.6
HACD3Q9P035 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HACD3Q9P035 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
HACD3Q9P035 MIR4674-201ENST00000582457 87 ntBASIC18.77■□□□□ 0.6
HACD3Q9P035 AC008556.1-201ENST00000610908 2040 ntBASIC18.77■□□□□ 0.6
HACD3Q9P035 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HACD3Q9P035 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
HACD3Q9P035 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HACD3Q9P035 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.77■□□□□ 0.59
HACD3Q9P035 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.77■□□□□ 0.59
HACD3Q9P035 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
HACD3Q9P035 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.77■□□□□ 0.59
HACD3Q9P035 AL357033.4-201ENST00000617703 1807 ntBASIC18.77■□□□□ 0.59
HACD3Q9P035 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HACD3Q9P035 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HACD3Q9P035 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.76■□□□□ 0.59
HACD3Q9P035 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HACD3Q9P035 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HACD3Q9P035 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.76■□□□□ 0.59
HACD3Q9P035 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HACD3Q9P035 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HACD3Q9P035 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
HACD3Q9P035 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HACD3Q9P035 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HACD3Q9P035 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
HACD3Q9P035 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
HACD3Q9P035 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HACD3Q9P035 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HACD3Q9P035 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
HACD3Q9P035 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HACD3Q9P035 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HACD3Q9P035 MIR564-202ENST00000385049 94 ntBASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms