Protein–RNA interactions for Protein: Q9NZ63

C9orf78, Telomere length and silencing protein 1 homolog, humanhuman

Predicted RBP Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78Q9NZ63 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
C9orf78Q9NZ63 DBP-204ENST00000599385 709 ntTSL 3 BASIC23.29■■□□□ 1.32
C9orf78Q9NZ63 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
C9orf78Q9NZ63 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
C9orf78Q9NZ63 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
C9orf78Q9NZ63 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
C9orf78Q9NZ63 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC23.29■■□□□ 1.32
C9orf78Q9NZ63 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
C9orf78Q9NZ63 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC23.28■■□□□ 1.32
C9orf78Q9NZ63 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC23.28■■□□□ 1.32
C9orf78Q9NZ63 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
C9orf78Q9NZ63 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC23.28■■□□□ 1.32
C9orf78Q9NZ63 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
C9orf78Q9NZ63 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC23.28■■□□□ 1.32
C9orf78Q9NZ63 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
C9orf78Q9NZ63 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC23.28■■□□□ 1.32
C9orf78Q9NZ63 VENTXP5-201ENST00000523979 775 ntBASIC23.28■■□□□ 1.32
C9orf78Q9NZ63 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC23.28■■□□□ 1.32
C9orf78Q9NZ63 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC23.28■■□□□ 1.32
C9orf78Q9NZ63 AL136038.3-201ENST00000561909 1096 ntBASIC23.28■■□□□ 1.32
C9orf78Q9NZ63 MIR3180-4-201ENST00000582223 153 ntBASIC23.28■■□□□ 1.32
C9orf78Q9NZ63 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC23.28■■□□□ 1.32
C9orf78Q9NZ63 AC091076.1-201ENST00000610741 619 ntBASIC23.28■■□□□ 1.32
C9orf78Q9NZ63 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC23.28■■□□□ 1.32
C9orf78Q9NZ63 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC23.28■■□□□ 1.32
C9orf78Q9NZ63 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC23.28■■□□□ 1.32
C9orf78Q9NZ63 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC23.28■■□□□ 1.32
C9orf78Q9NZ63 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC23.28■■□□□ 1.32
C9orf78Q9NZ63 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC23.27■■□□□ 1.32
C9orf78Q9NZ63 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
C9orf78Q9NZ63 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC23.27■■□□□ 1.32
C9orf78Q9NZ63 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
C9orf78Q9NZ63 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
C9orf78Q9NZ63 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
C9orf78Q9NZ63 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
C9orf78Q9NZ63 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
C9orf78Q9NZ63 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
C9orf78Q9NZ63 AP000593.1-201ENST00000393668 712 ntBASIC23.27■■□□□ 1.32
C9orf78Q9NZ63 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
C9orf78Q9NZ63 SPDYE13P-201ENST00000445314 798 ntBASIC23.27■■□□□ 1.32
C9orf78Q9NZ63 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC23.27■■□□□ 1.32
C9orf78Q9NZ63 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC23.27■■□□□ 1.32
C9orf78Q9NZ63 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC23.27■■□□□ 1.32
C9orf78Q9NZ63 USF2-205ENST00000594064 1179 ntTSL 2 BASIC23.27■■□□□ 1.32
C9orf78Q9NZ63 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
C9orf78Q9NZ63 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
C9orf78Q9NZ63 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC23.27■■□□□ 1.32
C9orf78Q9NZ63 AC005332.1-201ENST00000577698 1310 ntBASIC23.27■■□□□ 1.32
C9orf78Q9NZ63 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
C9orf78Q9NZ63 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC23.27■■□□□ 1.31
C9orf78Q9NZ63 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.31
C9orf78Q9NZ63 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC23.26■■□□□ 1.31
C9orf78Q9NZ63 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
C9orf78Q9NZ63 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
C9orf78Q9NZ63 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
C9orf78Q9NZ63 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
C9orf78Q9NZ63 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
C9orf78Q9NZ63 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
C9orf78Q9NZ63 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
C9orf78Q9NZ63 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
C9orf78Q9NZ63 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
C9orf78Q9NZ63 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
C9orf78Q9NZ63 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC23.26■■□□□ 1.31
C9orf78Q9NZ63 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
C9orf78Q9NZ63 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
C9orf78Q9NZ63 AL136038.4-201ENST00000603606 1261 ntBASIC23.26■■□□□ 1.31
C9orf78Q9NZ63 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC23.26■■□□□ 1.31
C9orf78Q9NZ63 CLN6-214ENST00000636314 442 ntTSL 3 BASIC23.26■■□□□ 1.31
C9orf78Q9NZ63 AP000550.4-202ENST00000639755 178 ntBASIC23.26■■□□□ 1.31
C9orf78Q9NZ63 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
C9orf78Q9NZ63 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
C9orf78Q9NZ63 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
C9orf78Q9NZ63 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC23.26■■□□□ 1.31
C9orf78Q9NZ63 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
C9orf78Q9NZ63 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
C9orf78Q9NZ63 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
C9orf78Q9NZ63 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
C9orf78Q9NZ63 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
C9orf78Q9NZ63 AL391807.1-203ENST00000604392 2365 ntBASIC23.26■■□□□ 1.31
C9orf78Q9NZ63 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
C9orf78Q9NZ63 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
C9orf78Q9NZ63 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC23.25■■□□□ 1.31
C9orf78Q9NZ63 AP000974.1-201ENST00000623909 2387 ntBASIC23.25■■□□□ 1.31
C9orf78Q9NZ63 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC23.25■■□□□ 1.31
C9orf78Q9NZ63 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC23.25■■□□□ 1.31
C9orf78Q9NZ63 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC23.25■■□□□ 1.31
C9orf78Q9NZ63 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
C9orf78Q9NZ63 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
C9orf78Q9NZ63 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
C9orf78Q9NZ63 AL499627.1-201ENST00000569373 2188 ntBASIC23.25■■□□□ 1.31
C9orf78Q9NZ63 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
C9orf78Q9NZ63 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
C9orf78Q9NZ63 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC23.25■■□□□ 1.31
C9orf78Q9NZ63 IER3-202ENST00000376377 1350 ntBASIC23.25■■□□□ 1.31
C9orf78Q9NZ63 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
C9orf78Q9NZ63 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC23.25■■□□□ 1.31
C9orf78Q9NZ63 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
C9orf78Q9NZ63 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
C9orf78Q9NZ63 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
C9orf78Q9NZ63 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms