Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SPHK1Q9NYA1 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
SPHK1Q9NYA1 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SPHK1Q9NYA1 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SPHK1Q9NYA1 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SPHK1Q9NYA1 AC112907.2-201ENST00000448639 330 ntBASIC17.89■□□□□ 0.45
SPHK1Q9NYA1 KRT18P41-201ENST00000518924 1277 ntBASIC17.89■□□□□ 0.45
SPHK1Q9NYA1 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SPHK1Q9NYA1 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SPHK1Q9NYA1 AC087388.1-201ENST00000571370 1112 ntBASIC17.89■□□□□ 0.45
SPHK1Q9NYA1 MIR3917-201ENST00000580971 93 ntBASIC17.89■□□□□ 0.45
SPHK1Q9NYA1 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.89■□□□□ 0.45
SPHK1Q9NYA1 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SPHK1Q9NYA1 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
SPHK1Q9NYA1 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.89■□□□□ 0.45
SPHK1Q9NYA1 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SPHK1Q9NYA1 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.89■□□□□ 0.45
SPHK1Q9NYA1 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SPHK1Q9NYA1 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SPHK1Q9NYA1 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.89■□□□□ 0.45
SPHK1Q9NYA1 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SPHK1Q9NYA1 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
SPHK1Q9NYA1 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
SPHK1Q9NYA1 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SPHK1Q9NYA1 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SPHK1Q9NYA1 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.88■□□□□ 0.45
SPHK1Q9NYA1 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SPHK1Q9NYA1 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.88■□□□□ 0.45
SPHK1Q9NYA1 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SPHK1Q9NYA1 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SPHK1Q9NYA1 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SPHK1Q9NYA1 AL031133.1-201ENST00000406807 723 ntBASIC17.88■□□□□ 0.45
SPHK1Q9NYA1 AC092597.1-201ENST00000487352 616 ntBASIC17.88■□□□□ 0.45
SPHK1Q9NYA1 AC034232.1-201ENST00000506026 1064 ntBASIC17.88■□□□□ 0.45
SPHK1Q9NYA1 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SPHK1Q9NYA1 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.88■□□□□ 0.45
SPHK1Q9NYA1 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.88■□□□□ 0.45
SPHK1Q9NYA1 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
SPHK1Q9NYA1 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.88■□□□□ 0.45
SPHK1Q9NYA1 HYMAI.1-201ENST00000620949 238 ntBASIC17.88■□□□□ 0.45
SPHK1Q9NYA1 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.88■□□□□ 0.45
SPHK1Q9NYA1 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SPHK1Q9NYA1 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SPHK1Q9NYA1 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.88■□□□□ 0.45
SPHK1Q9NYA1 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
SPHK1Q9NYA1 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SPHK1Q9NYA1 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SPHK1Q9NYA1 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
SPHK1Q9NYA1 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.88■□□□□ 0.45
SPHK1Q9NYA1 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SPHK1Q9NYA1 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.88■□□□□ 0.45
SPHK1Q9NYA1 TNXA-203ENST00000507684 2038 ntBASIC17.88■□□□□ 0.45
SPHK1Q9NYA1 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SPHK1Q9NYA1 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SPHK1Q9NYA1 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
SPHK1Q9NYA1 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
SPHK1Q9NYA1 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SPHK1Q9NYA1 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SPHK1Q9NYA1 AL671277.2-201ENST00000458060 996 ntBASIC17.87■□□□□ 0.45
SPHK1Q9NYA1 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.87■□□□□ 0.45
SPHK1Q9NYA1 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.87■□□□□ 0.45
SPHK1Q9NYA1 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.87■□□□□ 0.45
SPHK1Q9NYA1 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.87■□□□□ 0.45
SPHK1Q9NYA1 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SPHK1Q9NYA1 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
SPHK1Q9NYA1 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
SPHK1Q9NYA1 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
SPHK1Q9NYA1 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SPHK1Q9NYA1 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SPHK1Q9NYA1 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SPHK1Q9NYA1 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.87■□□□□ 0.45
SPHK1Q9NYA1 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
SPHK1Q9NYA1 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SPHK1Q9NYA1 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.86■□□□□ 0.45
SPHK1Q9NYA1 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SPHK1Q9NYA1 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SPHK1Q9NYA1 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SPHK1Q9NYA1 AC093503.3-201ENST00000624917 2352 ntBASIC17.86■□□□□ 0.45
SPHK1Q9NYA1 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SPHK1Q9NYA1 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.86■□□□□ 0.45
SPHK1Q9NYA1 AC079602.3-201ENST00000623931 403 ntBASIC17.86■□□□□ 0.45
SPHK1Q9NYA1 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SPHK1Q9NYA1 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SPHK1Q9NYA1 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SPHK1Q9NYA1 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SPHK1Q9NYA1 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SPHK1Q9NYA1 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.86■□□□□ 0.45
SPHK1Q9NYA1 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.86■□□□□ 0.45
SPHK1Q9NYA1 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SPHK1Q9NYA1 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SPHK1Q9NYA1 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.86■□□□□ 0.45
SPHK1Q9NYA1 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
SPHK1Q9NYA1 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.85■□□□□ 0.45
SPHK1Q9NYA1 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
SPHK1Q9NYA1 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SPHK1Q9NYA1 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SPHK1Q9NYA1 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.85■□□□□ 0.45
SPHK1Q9NYA1 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
SPHK1Q9NYA1 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
SPHK1Q9NYA1 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms