Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.95■□□□□ 0.46
CUEDC1Q9NWM3 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.95■□□□□ 0.46
CUEDC1Q9NWM3 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.95■□□□□ 0.46
CUEDC1Q9NWM3 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.95■□□□□ 0.46
CUEDC1Q9NWM3 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.95■□□□□ 0.46
CUEDC1Q9NWM3 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.95■□□□□ 0.46
CUEDC1Q9NWM3 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CUEDC1Q9NWM3 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.95■□□□□ 0.46
CUEDC1Q9NWM3 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CUEDC1Q9NWM3 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CUEDC1Q9NWM3 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CUEDC1Q9NWM3 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.95■□□□□ 0.46
CUEDC1Q9NWM3 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CUEDC1Q9NWM3 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CUEDC1Q9NWM3 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.95■□□□□ 0.46
CUEDC1Q9NWM3 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.95■□□□□ 0.46
CUEDC1Q9NWM3 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CUEDC1Q9NWM3 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CUEDC1Q9NWM3 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CUEDC1Q9NWM3 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CUEDC1Q9NWM3 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CUEDC1Q9NWM3 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CUEDC1Q9NWM3 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CUEDC1Q9NWM3 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.94■□□□□ 0.46
CUEDC1Q9NWM3 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CUEDC1Q9NWM3 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CUEDC1Q9NWM3 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CUEDC1Q9NWM3 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.94■□□□□ 0.46
CUEDC1Q9NWM3 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CUEDC1Q9NWM3 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CUEDC1Q9NWM3 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
CUEDC1Q9NWM3 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CUEDC1Q9NWM3 LIN28AP1-201ENST00000429574 405 ntBASIC17.94■□□□□ 0.46
CUEDC1Q9NWM3 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.94■□□□□ 0.46
CUEDC1Q9NWM3 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CUEDC1Q9NWM3 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CUEDC1Q9NWM3 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.94■□□□□ 0.46
CUEDC1Q9NWM3 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.94■□□□□ 0.46
CUEDC1Q9NWM3 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CUEDC1Q9NWM3 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.94■□□□□ 0.46
CUEDC1Q9NWM3 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CUEDC1Q9NWM3 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.94■□□□□ 0.46
CUEDC1Q9NWM3 AL138966.2-201ENST00000621997 464 ntBASIC17.94■□□□□ 0.46
CUEDC1Q9NWM3 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CUEDC1Q9NWM3 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.94■□□□□ 0.46
CUEDC1Q9NWM3 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CUEDC1Q9NWM3 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CUEDC1Q9NWM3 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CUEDC1Q9NWM3 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.94■□□□□ 0.46
CUEDC1Q9NWM3 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CUEDC1Q9NWM3 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CUEDC1Q9NWM3 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CUEDC1Q9NWM3 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CUEDC1Q9NWM3 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CUEDC1Q9NWM3 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
CUEDC1Q9NWM3 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CUEDC1Q9NWM3 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CUEDC1Q9NWM3 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CUEDC1Q9NWM3 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CUEDC1Q9NWM3 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CUEDC1Q9NWM3 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CUEDC1Q9NWM3 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CUEDC1Q9NWM3 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CUEDC1Q9NWM3 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CUEDC1Q9NWM3 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CUEDC1Q9NWM3 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CUEDC1Q9NWM3 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CUEDC1Q9NWM3 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.93■□□□□ 0.46
CUEDC1Q9NWM3 UPK3BP1-201ENST00000428678 509 ntBASIC17.93■□□□□ 0.46
CUEDC1Q9NWM3 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.93■□□□□ 0.46
CUEDC1Q9NWM3 ATP5G1P1-201ENST00000448724 379 ntBASIC17.93■□□□□ 0.46
CUEDC1Q9NWM3 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CUEDC1Q9NWM3 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.93■□□□□ 0.46
CUEDC1Q9NWM3 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.93■□□□□ 0.46
CUEDC1Q9NWM3 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CUEDC1Q9NWM3 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.93■□□□□ 0.46
CUEDC1Q9NWM3 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CUEDC1Q9NWM3 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CUEDC1Q9NWM3 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CUEDC1Q9NWM3 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CUEDC1Q9NWM3 AC026471.1-201ENST00000564629 3026 ntBASIC17.93■□□□□ 0.46
CUEDC1Q9NWM3 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.93■□□□□ 0.46
CUEDC1Q9NWM3 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CUEDC1Q9NWM3 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.92■□□□□ 0.46
CUEDC1Q9NWM3 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CUEDC1Q9NWM3 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CUEDC1Q9NWM3 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CUEDC1Q9NWM3 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.92■□□□□ 0.46
CUEDC1Q9NWM3 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CUEDC1Q9NWM3 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CUEDC1Q9NWM3 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CUEDC1Q9NWM3 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CUEDC1Q9NWM3 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CUEDC1Q9NWM3 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CUEDC1Q9NWM3 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CUEDC1Q9NWM3 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.92■□□□□ 0.46
CUEDC1Q9NWM3 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CUEDC1Q9NWM3 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.92■□□□□ 0.46
CUEDC1Q9NWM3 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CUEDC1Q9NWM3 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms