Protein–RNA interactions for Protein: Q9NPP4

NLRC4, NLR family CARD domain-containing protein 4, humanhuman

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4Q9NPP4 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC20.17■□□□□ 0.82
NLRC4Q9NPP4 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.17■□□□□ 0.82
NLRC4Q9NPP4 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.17■□□□□ 0.82
NLRC4Q9NPP4 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
NLRC4Q9NPP4 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC20.17■□□□□ 0.82
NLRC4Q9NPP4 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NLRC4Q9NPP4 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.16■□□□□ 0.82
NLRC4Q9NPP4 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.16■□□□□ 0.82
NLRC4Q9NPP4 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.16■□□□□ 0.82
NLRC4Q9NPP4 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NLRC4Q9NPP4 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NLRC4Q9NPP4 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NLRC4Q9NPP4 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NLRC4Q9NPP4 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NLRC4Q9NPP4 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NLRC4Q9NPP4 AC098590.1-201ENST00000468126 897 ntBASIC20.16■□□□□ 0.82
NLRC4Q9NPP4 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.16■□□□□ 0.82
NLRC4Q9NPP4 AP000692.2-201ENST00000608391 879 ntBASIC20.16■□□□□ 0.82
NLRC4Q9NPP4 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NLRC4Q9NPP4 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
NLRC4Q9NPP4 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.16■□□□□ 0.82
NLRC4Q9NPP4 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NLRC4Q9NPP4 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
NLRC4Q9NPP4 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
NLRC4Q9NPP4 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
NLRC4Q9NPP4 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.16■□□□□ 0.82
NLRC4Q9NPP4 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.16■□□□□ 0.82
NLRC4Q9NPP4 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.16■□□□□ 0.82
NLRC4Q9NPP4 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC20.16■□□□□ 0.82
NLRC4Q9NPP4 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.15■□□□□ 0.82
NLRC4Q9NPP4 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NLRC4Q9NPP4 AC008556.1-201ENST00000610908 2040 ntBASIC20.15■□□□□ 0.82
NLRC4Q9NPP4 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
NLRC4Q9NPP4 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NLRC4Q9NPP4 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NLRC4Q9NPP4 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
NLRC4Q9NPP4 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NLRC4Q9NPP4 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NLRC4Q9NPP4 AL158047.1-201ENST00000445918 881 ntBASIC20.15■□□□□ 0.82
NLRC4Q9NPP4 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NLRC4Q9NPP4 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.15■□□□□ 0.82
NLRC4Q9NPP4 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NLRC4Q9NPP4 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.15■□□□□ 0.82
NLRC4Q9NPP4 KRT8P45-201ENST00000414328 1447 ntBASIC20.15■□□□□ 0.82
NLRC4Q9NPP4 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
NLRC4Q9NPP4 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
NLRC4Q9NPP4 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NLRC4Q9NPP4 CD276-203ENST00000537340 2439 ntTSL 2 BASIC20.15■□□□□ 0.82
NLRC4Q9NPP4 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
NLRC4Q9NPP4 AC135776.1-201ENST00000319817 2481 ntBASIC20.14■□□□□ 0.82
NLRC4Q9NPP4 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20.14■□□□□ 0.81
NLRC4Q9NPP4 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC20.14■□□□□ 0.81
NLRC4Q9NPP4 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC20.14■□□□□ 0.81
NLRC4Q9NPP4 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NLRC4Q9NPP4 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NLRC4Q9NPP4 AC112777.1-201ENST00000540175 1423 ntBASIC20.14■□□□□ 0.81
NLRC4Q9NPP4 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NLRC4Q9NPP4 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.14■□□□□ 0.81
NLRC4Q9NPP4 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.14■□□□□ 0.81
NLRC4Q9NPP4 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.14■□□□□ 0.81
NLRC4Q9NPP4 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
NLRC4Q9NPP4 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.81
NLRC4Q9NPP4 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NLRC4Q9NPP4 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NLRC4Q9NPP4 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
NLRC4Q9NPP4 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
NLRC4Q9NPP4 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC20.14■□□□□ 0.81
NLRC4Q9NPP4 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NLRC4Q9NPP4 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
NLRC4Q9NPP4 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
NLRC4Q9NPP4 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
NLRC4Q9NPP4 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.13■□□□□ 0.81
NLRC4Q9NPP4 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NLRC4Q9NPP4 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.13■□□□□ 0.81
NLRC4Q9NPP4 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NLRC4Q9NPP4 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NLRC4Q9NPP4 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NLRC4Q9NPP4 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NLRC4Q9NPP4 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NLRC4Q9NPP4 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
NLRC4Q9NPP4 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.13■□□□□ 0.81
NLRC4Q9NPP4 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
NLRC4Q9NPP4 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
NLRC4Q9NPP4 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.13■□□□□ 0.81
NLRC4Q9NPP4 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.13■□□□□ 0.81
NLRC4Q9NPP4 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.13■□□□□ 0.81
NLRC4Q9NPP4 MYC-208ENST00000641036 567 ntBASIC20.13■□□□□ 0.81
NLRC4Q9NPP4 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NLRC4Q9NPP4 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NLRC4Q9NPP4 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
NLRC4Q9NPP4 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC20.13■□□□□ 0.81
NLRC4Q9NPP4 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NLRC4Q9NPP4 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
NLRC4Q9NPP4 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
NLRC4Q9NPP4 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.12■□□□□ 0.81
NLRC4Q9NPP4 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
NLRC4Q9NPP4 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
NLRC4Q9NPP4 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
NLRC4Q9NPP4 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC20.12■□□□□ 0.81
NLRC4Q9NPP4 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms