Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.2■□□□□ 0.66
FOXP3Q9BZS1 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
FOXP3Q9BZS1 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FOXP3Q9BZS1 AL353807.1-201ENST00000427475 662 ntBASIC19.2■□□□□ 0.66
FOXP3Q9BZS1 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.2■□□□□ 0.66
FOXP3Q9BZS1 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.2■□□□□ 0.66
FOXP3Q9BZS1 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.2■□□□□ 0.66
FOXP3Q9BZS1 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
FOXP3Q9BZS1 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
FOXP3Q9BZS1 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.2■□□□□ 0.66
FOXP3Q9BZS1 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.2■□□□□ 0.66
FOXP3Q9BZS1 AC097493.4-201ENST00000641197 219 ntBASIC19.2■□□□□ 0.66
FOXP3Q9BZS1 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
FOXP3Q9BZS1 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FOXP3Q9BZS1 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
FOXP3Q9BZS1 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FOXP3Q9BZS1 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.2■□□□□ 0.66
FOXP3Q9BZS1 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.2■□□□□ 0.66
FOXP3Q9BZS1 AC090340.1-201ENST00000620778 4980 ntBASIC19.2■□□□□ 0.66
FOXP3Q9BZS1 BCL2-203ENST00000589955 5011 ntBASIC19.2■□□□□ 0.66
FOXP3Q9BZS1 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FOXP3Q9BZS1 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FOXP3Q9BZS1 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
FOXP3Q9BZS1 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.2■□□□□ 0.66
FOXP3Q9BZS1 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.19■□□□□ 0.66
FOXP3Q9BZS1 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXP3Q9BZS1 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXP3Q9BZS1 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXP3Q9BZS1 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
FOXP3Q9BZS1 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.19■□□□□ 0.66
FOXP3Q9BZS1 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXP3Q9BZS1 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
FOXP3Q9BZS1 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXP3Q9BZS1 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
FOXP3Q9BZS1 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXP3Q9BZS1 RCN1P1-201ENST00000400413 996 ntBASIC19.19■□□□□ 0.66
FOXP3Q9BZS1 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.19■□□□□ 0.66
FOXP3Q9BZS1 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.19■□□□□ 0.66
FOXP3Q9BZS1 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.19■□□□□ 0.66
FOXP3Q9BZS1 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.19■□□□□ 0.66
FOXP3Q9BZS1 AC012306.2-201ENST00000609350 630 ntBASIC19.19■□□□□ 0.66
FOXP3Q9BZS1 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.19■□□□□ 0.66
FOXP3Q9BZS1 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.19■□□□□ 0.66
FOXP3Q9BZS1 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.19■□□□□ 0.66
FOXP3Q9BZS1 KRT8P32-201ENST00000512863 1461 ntBASIC19.19■□□□□ 0.66
FOXP3Q9BZS1 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXP3Q9BZS1 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.19■□□□□ 0.66
FOXP3Q9BZS1 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
FOXP3Q9BZS1 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXP3Q9BZS1 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.19■□□□□ 0.66
FOXP3Q9BZS1 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.19■□□□□ 0.66
FOXP3Q9BZS1 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.19■□□□□ 0.66
FOXP3Q9BZS1 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
FOXP3Q9BZS1 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
FOXP3Q9BZS1 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
FOXP3Q9BZS1 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
FOXP3Q9BZS1 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FOXP3Q9BZS1 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FOXP3Q9BZS1 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FOXP3Q9BZS1 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
FOXP3Q9BZS1 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
FOXP3Q9BZS1 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FOXP3Q9BZS1 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.18■□□□□ 0.66
FOXP3Q9BZS1 HCG11-201ENST00000411553 5696 ntBASIC19.18■□□□□ 0.66
FOXP3Q9BZS1 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FOXP3Q9BZS1 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FOXP3Q9BZS1 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FOXP3Q9BZS1 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
FOXP3Q9BZS1 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
FOXP3Q9BZS1 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
FOXP3Q9BZS1 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.18■□□□□ 0.66
FOXP3Q9BZS1 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
FOXP3Q9BZS1 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FOXP3Q9BZS1 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FOXP3Q9BZS1 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.18■□□□□ 0.66
FOXP3Q9BZS1 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.18■□□□□ 0.66
FOXP3Q9BZS1 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.18■□□□□ 0.66
FOXP3Q9BZS1 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.18■□□□□ 0.66
FOXP3Q9BZS1 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.18■□□□□ 0.66
FOXP3Q9BZS1 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FOXP3Q9BZS1 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FOXP3Q9BZS1 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
FOXP3Q9BZS1 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FOXP3Q9BZS1 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
FOXP3Q9BZS1 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
FOXP3Q9BZS1 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
FOXP3Q9BZS1 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.18■□□□□ 0.66
FOXP3Q9BZS1 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.18■□□□□ 0.66
FOXP3Q9BZS1 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FOXP3Q9BZS1 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
FOXP3Q9BZS1 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FOXP3Q9BZS1 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.17■□□□□ 0.66
FOXP3Q9BZS1 AP000997.3-201ENST00000623333 2250 ntBASIC19.17■□□□□ 0.66
FOXP3Q9BZS1 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
FOXP3Q9BZS1 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
FOXP3Q9BZS1 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FOXP3Q9BZS1 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.17■□□□□ 0.66
FOXP3Q9BZS1 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FOXP3Q9BZS1 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.17■□□□□ 0.66
FOXP3Q9BZS1 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms