Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC22.18■■□□□ 1.14
UPF3BQ9BZI7 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC22.18■■□□□ 1.14
UPF3BQ9BZI7 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
UPF3BQ9BZI7 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
UPF3BQ9BZI7 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
UPF3BQ9BZI7 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC22.18■■□□□ 1.14
UPF3BQ9BZI7 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
UPF3BQ9BZI7 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
UPF3BQ9BZI7 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
UPF3BQ9BZI7 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
UPF3BQ9BZI7 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC22.18■■□□□ 1.14
UPF3BQ9BZI7 MFAP1P1-201ENST00000442257 1255 ntBASIC22.18■■□□□ 1.14
UPF3BQ9BZI7 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC22.18■■□□□ 1.14
UPF3BQ9BZI7 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC22.18■■□□□ 1.14
UPF3BQ9BZI7 Z99916.2-201ENST00000604037 246 ntBASIC22.18■■□□□ 1.14
UPF3BQ9BZI7 REXO1L10P-201ENST00000615707 1290 ntBASIC22.18■■□□□ 1.14
UPF3BQ9BZI7 AL049637.2-201ENST00000641778 930 ntBASIC22.18■■□□□ 1.14
UPF3BQ9BZI7 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
UPF3BQ9BZI7 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
UPF3BQ9BZI7 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
UPF3BQ9BZI7 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC22.18■■□□□ 1.14
UPF3BQ9BZI7 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC22.17■■□□□ 1.14
UPF3BQ9BZI7 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
UPF3BQ9BZI7 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
UPF3BQ9BZI7 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
UPF3BQ9BZI7 CD276-203ENST00000537340 2439 ntTSL 2 BASIC22.17■■□□□ 1.14
UPF3BQ9BZI7 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
UPF3BQ9BZI7 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
UPF3BQ9BZI7 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC22.17■■□□□ 1.14
UPF3BQ9BZI7 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
UPF3BQ9BZI7 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
UPF3BQ9BZI7 AC012618.2-201ENST00000428058 849 ntBASIC22.17■■□□□ 1.14
UPF3BQ9BZI7 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
UPF3BQ9BZI7 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC22.17■■□□□ 1.14
UPF3BQ9BZI7 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
UPF3BQ9BZI7 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
UPF3BQ9BZI7 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC22.17■■□□□ 1.14
UPF3BQ9BZI7 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
UPF3BQ9BZI7 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC22.17■■□□□ 1.14
UPF3BQ9BZI7 ABALON-201ENST00000629058 1903 ntBASIC22.17■■□□□ 1.14
UPF3BQ9BZI7 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC22.17■■□□□ 1.14
UPF3BQ9BZI7 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
UPF3BQ9BZI7 GPAT2P1-201ENST00000444924 1672 ntBASIC22.17■■□□□ 1.14
UPF3BQ9BZI7 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
UPF3BQ9BZI7 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
UPF3BQ9BZI7 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
UPF3BQ9BZI7 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
UPF3BQ9BZI7 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
UPF3BQ9BZI7 KRT8P45-201ENST00000414328 1447 ntBASIC22.16■■□□□ 1.14
UPF3BQ9BZI7 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
UPF3BQ9BZI7 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
UPF3BQ9BZI7 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
UPF3BQ9BZI7 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
UPF3BQ9BZI7 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
UPF3BQ9BZI7 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
UPF3BQ9BZI7 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC22.16■■□□□ 1.14
UPF3BQ9BZI7 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
UPF3BQ9BZI7 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
UPF3BQ9BZI7 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
UPF3BQ9BZI7 AC135776.1-201ENST00000319817 2481 ntBASIC22.16■■□□□ 1.14
UPF3BQ9BZI7 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
UPF3BQ9BZI7 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
UPF3BQ9BZI7 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC22.15■■□□□ 1.14
UPF3BQ9BZI7 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC22.15■■□□□ 1.14
UPF3BQ9BZI7 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC22.15■■□□□ 1.14
UPF3BQ9BZI7 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
UPF3BQ9BZI7 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
UPF3BQ9BZI7 EML3-217ENST00000531557 2509 ntTSL 5 BASIC22.15■■□□□ 1.14
UPF3BQ9BZI7 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
UPF3BQ9BZI7 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
UPF3BQ9BZI7 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
UPF3BQ9BZI7 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC22.15■■□□□ 1.14
UPF3BQ9BZI7 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC22.15■■□□□ 1.14
UPF3BQ9BZI7 AL109659.2-201ENST00000606809 1674 ntBASIC22.15■■□□□ 1.14
UPF3BQ9BZI7 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
UPF3BQ9BZI7 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC22.15■■□□□ 1.14
UPF3BQ9BZI7 AC097488.1-201ENST00000507834 756 ntBASIC22.15■■□□□ 1.14
UPF3BQ9BZI7 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC22.15■■□□□ 1.14
UPF3BQ9BZI7 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC22.15■■□□□ 1.14
UPF3BQ9BZI7 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC22.15■■□□□ 1.14
UPF3BQ9BZI7 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
UPF3BQ9BZI7 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC22.15■■□□□ 1.14
UPF3BQ9BZI7 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
UPF3BQ9BZI7 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
UPF3BQ9BZI7 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC22.15■■□□□ 1.14
UPF3BQ9BZI7 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
UPF3BQ9BZI7 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
UPF3BQ9BZI7 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
UPF3BQ9BZI7 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
UPF3BQ9BZI7 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC22.15■■□□□ 1.14
UPF3BQ9BZI7 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
UPF3BQ9BZI7 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
UPF3BQ9BZI7 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
UPF3BQ9BZI7 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC22.14■■□□□ 1.14
UPF3BQ9BZI7 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC22.14■■□□□ 1.14
UPF3BQ9BZI7 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC22.14■■□□□ 1.13
UPF3BQ9BZI7 ENSA-205ENST00000361532 792 ntTSL 2 BASIC22.14■■□□□ 1.13
UPF3BQ9BZI7 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
UPF3BQ9BZI7 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
UPF3BQ9BZI7 AL023284.2-201ENST00000405850 579 ntBASIC22.14■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms