Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SSBP4Q9BWG4 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SSBP4Q9BWG4 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SSBP4Q9BWG4 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SSBP4Q9BWG4 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC14.05□□□□□ -0.16
SSBP4Q9BWG4 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SSBP4Q9BWG4 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC14.04□□□□□ -0.16
SSBP4Q9BWG4 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSBP4Q9BWG4 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSBP4Q9BWG4 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSBP4Q9BWG4 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SSBP4Q9BWG4 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSBP4Q9BWG4 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
SSBP4Q9BWG4 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSBP4Q9BWG4 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSBP4Q9BWG4 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSBP4Q9BWG4 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSBP4Q9BWG4 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SSBP4Q9BWG4 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
SSBP4Q9BWG4 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSBP4Q9BWG4 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSBP4Q9BWG4 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
SSBP4Q9BWG4 LGR4-203ENST00000480977 492 ntTSL 2 BASIC14.04□□□□□ -0.16
SSBP4Q9BWG4 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC14.04□□□□□ -0.16
SSBP4Q9BWG4 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSBP4Q9BWG4 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC14.04□□□□□ -0.16
SSBP4Q9BWG4 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSBP4Q9BWG4 AC011767.1-201ENST00000617410 1153 ntBASIC14.04□□□□□ -0.16
SSBP4Q9BWG4 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSBP4Q9BWG4 MST1L-201ENST00000442552 2185 ntBASIC14.04□□□□□ -0.16
SSBP4Q9BWG4 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
SSBP4Q9BWG4 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
SSBP4Q9BWG4 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC14.04□□□□□ -0.16
SSBP4Q9BWG4 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC14.04□□□□□ -0.16
SSBP4Q9BWG4 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSBP4Q9BWG4 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSBP4Q9BWG4 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSBP4Q9BWG4 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
SSBP4Q9BWG4 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSBP4Q9BWG4 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSBP4Q9BWG4 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC14.04□□□□□ -0.16
SSBP4Q9BWG4 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SSBP4Q9BWG4 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC14.04□□□□□ -0.16
SSBP4Q9BWG4 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SSBP4Q9BWG4 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSBP4Q9BWG4 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SSBP4Q9BWG4 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SSBP4Q9BWG4 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SSBP4Q9BWG4 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SSBP4Q9BWG4 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC14.03□□□□□ -0.16
SSBP4Q9BWG4 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC14.03□□□□□ -0.16
SSBP4Q9BWG4 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SSBP4Q9BWG4 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
SSBP4Q9BWG4 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SSBP4Q9BWG4 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.03□□□□□ -0.16
SSBP4Q9BWG4 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SSBP4Q9BWG4 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SSBP4Q9BWG4 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC14.03□□□□□ -0.16
SSBP4Q9BWG4 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SSBP4Q9BWG4 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC14.03□□□□□ -0.16
SSBP4Q9BWG4 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC14.03□□□□□ -0.16
SSBP4Q9BWG4 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SSBP4Q9BWG4 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SSBP4Q9BWG4 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SSBP4Q9BWG4 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SSBP4Q9BWG4 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SSBP4Q9BWG4 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SSBP4Q9BWG4 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC14.03□□□□□ -0.16
SSBP4Q9BWG4 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC14.03□□□□□ -0.16
SSBP4Q9BWG4 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
SSBP4Q9BWG4 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SSBP4Q9BWG4 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SSBP4Q9BWG4 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SSBP4Q9BWG4 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
SSBP4Q9BWG4 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SSBP4Q9BWG4 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
SSBP4Q9BWG4 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SSBP4Q9BWG4 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
SSBP4Q9BWG4 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC14.03□□□□□ -0.16
SSBP4Q9BWG4 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SSBP4Q9BWG4 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SSBP4Q9BWG4 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
SSBP4Q9BWG4 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SSBP4Q9BWG4 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
SSBP4Q9BWG4 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SSBP4Q9BWG4 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
SSBP4Q9BWG4 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
SSBP4Q9BWG4 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
SSBP4Q9BWG4 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SSBP4Q9BWG4 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SSBP4Q9BWG4 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SSBP4Q9BWG4 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC14.02□□□□□ -0.16
SSBP4Q9BWG4 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SSBP4Q9BWG4 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SSBP4Q9BWG4 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SSBP4Q9BWG4 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SSBP4Q9BWG4 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
SSBP4Q9BWG4 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
SSBP4Q9BWG4 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SSBP4Q9BWG4 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC14.02□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms