Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.8■□□□□ 0.76
PAAF1Q9BRP4 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PAAF1Q9BRP4 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PAAF1Q9BRP4 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
PAAF1Q9BRP4 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PAAF1Q9BRP4 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
PAAF1Q9BRP4 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.8■□□□□ 0.76
PAAF1Q9BRP4 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PAAF1Q9BRP4 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.8■□□□□ 0.76
PAAF1Q9BRP4 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.79■□□□□ 0.76
PAAF1Q9BRP4 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PAAF1Q9BRP4 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.79■□□□□ 0.76
PAAF1Q9BRP4 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
PAAF1Q9BRP4 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PAAF1Q9BRP4 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PAAF1Q9BRP4 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PAAF1Q9BRP4 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.79■□□□□ 0.76
PAAF1Q9BRP4 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.79■□□□□ 0.76
PAAF1Q9BRP4 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PAAF1Q9BRP4 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.79■□□□□ 0.76
PAAF1Q9BRP4 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.79■□□□□ 0.76
PAAF1Q9BRP4 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.79■□□□□ 0.76
PAAF1Q9BRP4 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.79■□□□□ 0.76
PAAF1Q9BRP4 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PAAF1Q9BRP4 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.79■□□□□ 0.76
PAAF1Q9BRP4 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
PAAF1Q9BRP4 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.79■□□□□ 0.76
PAAF1Q9BRP4 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PAAF1Q9BRP4 AL163051.1-201ENST00000569214 1512 ntBASIC19.79■□□□□ 0.76
PAAF1Q9BRP4 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.79■□□□□ 0.76
PAAF1Q9BRP4 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
PAAF1Q9BRP4 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
PAAF1Q9BRP4 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PAAF1Q9BRP4 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PAAF1Q9BRP4 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.79■□□□□ 0.76
PAAF1Q9BRP4 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PAAF1Q9BRP4 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.79■□□□□ 0.76
PAAF1Q9BRP4 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PAAF1Q9BRP4 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.79■□□□□ 0.76
PAAF1Q9BRP4 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
PAAF1Q9BRP4 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.78■□□□□ 0.76
PAAF1Q9BRP4 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PAAF1Q9BRP4 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PAAF1Q9BRP4 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PAAF1Q9BRP4 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
PAAF1Q9BRP4 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.78■□□□□ 0.76
PAAF1Q9BRP4 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.78■□□□□ 0.76
PAAF1Q9BRP4 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.78■□□□□ 0.76
PAAF1Q9BRP4 PRELID1P1-202ENST00000567272 903 ntBASIC19.78■□□□□ 0.76
PAAF1Q9BRP4 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.78■□□□□ 0.76
PAAF1Q9BRP4 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PAAF1Q9BRP4 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.78■□□□□ 0.76
PAAF1Q9BRP4 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PAAF1Q9BRP4 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PAAF1Q9BRP4 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PAAF1Q9BRP4 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PAAF1Q9BRP4 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PAAF1Q9BRP4 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PAAF1Q9BRP4 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.77■□□□□ 0.76
PAAF1Q9BRP4 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PAAF1Q9BRP4 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PAAF1Q9BRP4 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PAAF1Q9BRP4 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PAAF1Q9BRP4 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.77■□□□□ 0.76
PAAF1Q9BRP4 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.77■□□□□ 0.76
PAAF1Q9BRP4 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PAAF1Q9BRP4 IGHGP-201ENST00000390555 1178 ntBASIC19.77■□□□□ 0.76
PAAF1Q9BRP4 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.77■□□□□ 0.76
PAAF1Q9BRP4 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
PAAF1Q9BRP4 DRAXINP1-201ENST00000437611 948 ntBASIC19.77■□□□□ 0.76
PAAF1Q9BRP4 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.77■□□□□ 0.76
PAAF1Q9BRP4 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.77■□□□□ 0.76
PAAF1Q9BRP4 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.77■□□□□ 0.76
PAAF1Q9BRP4 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.77■□□□□ 0.76
PAAF1Q9BRP4 AC024563.2-201ENST00000603282 481 ntBASIC19.77■□□□□ 0.76
PAAF1Q9BRP4 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC19.77■□□□□ 0.76
PAAF1Q9BRP4 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PAAF1Q9BRP4 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PAAF1Q9BRP4 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.77■□□□□ 0.76
PAAF1Q9BRP4 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.77■□□□□ 0.75
PAAF1Q9BRP4 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.76■□□□□ 0.75
PAAF1Q9BRP4 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.76■□□□□ 0.75
PAAF1Q9BRP4 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PAAF1Q9BRP4 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.76■□□□□ 0.75
PAAF1Q9BRP4 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PAAF1Q9BRP4 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
PAAF1Q9BRP4 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PAAF1Q9BRP4 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PAAF1Q9BRP4 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PAAF1Q9BRP4 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PAAF1Q9BRP4 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.76■□□□□ 0.75
PAAF1Q9BRP4 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.76■□□□□ 0.75
PAAF1Q9BRP4 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PAAF1Q9BRP4 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.76■□□□□ 0.75
PAAF1Q9BRP4 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.76■□□□□ 0.75
PAAF1Q9BRP4 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
PAAF1Q9BRP4 LINC00265-3P-201ENST00000447588 903 ntBASIC19.76■□□□□ 0.75
PAAF1Q9BRP4 TOB2P1-201ENST00000469761 992 ntBASIC19.76■□□□□ 0.75
PAAF1Q9BRP4 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC19.76■□□□□ 0.75
PAAF1Q9BRP4 UNC93B7-201ENST00000509439 705 ntBASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms