Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
USB1Q9BQ65 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
USB1Q9BQ65 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
USB1Q9BQ65 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.56■□□□□ 0.24
USB1Q9BQ65 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
USB1Q9BQ65 AC063952.2-201ENST00000498792 1227 ntBASIC16.56■□□□□ 0.24
USB1Q9BQ65 AC084866.2-201ENST00000509956 449 ntTSL 2 BASIC16.56■□□□□ 0.24
USB1Q9BQ65 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.56■□□□□ 0.24
USB1Q9BQ65 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.56■□□□□ 0.24
USB1Q9BQ65 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.56■□□□□ 0.24
USB1Q9BQ65 AC008686.1-203ENST00000591826 463 ntTSL 2 BASIC16.56■□□□□ 0.24
USB1Q9BQ65 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
USB1Q9BQ65 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.56■□□□□ 0.24
USB1Q9BQ65 AC005332.7-201ENST00000614046 2005 ntBASIC16.56■□□□□ 0.24
USB1Q9BQ65 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.56■□□□□ 0.24
USB1Q9BQ65 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
USB1Q9BQ65 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
USB1Q9BQ65 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
USB1Q9BQ65 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
USB1Q9BQ65 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
USB1Q9BQ65 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.56■□□□□ 0.24
USB1Q9BQ65 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
USB1Q9BQ65 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
USB1Q9BQ65 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
USB1Q9BQ65 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
USB1Q9BQ65 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
USB1Q9BQ65 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
USB1Q9BQ65 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
USB1Q9BQ65 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.55■□□□□ 0.24
USB1Q9BQ65 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
USB1Q9BQ65 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
USB1Q9BQ65 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
USB1Q9BQ65 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.55■□□□□ 0.24
USB1Q9BQ65 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.55■□□□□ 0.24
USB1Q9BQ65 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.55■□□□□ 0.24
USB1Q9BQ65 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.55■□□□□ 0.24
USB1Q9BQ65 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
USB1Q9BQ65 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
USB1Q9BQ65 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
USB1Q9BQ65 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
USB1Q9BQ65 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
USB1Q9BQ65 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
USB1Q9BQ65 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.55■□□□□ 0.24
USB1Q9BQ65 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
USB1Q9BQ65 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
USB1Q9BQ65 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
USB1Q9BQ65 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
USB1Q9BQ65 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
USB1Q9BQ65 FAM8A6P-201ENST00000407496 1135 ntBASIC16.55■□□□□ 0.24
USB1Q9BQ65 TSPY5P-201ENST00000426936 936 ntBASIC16.55■□□□□ 0.24
USB1Q9BQ65 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
USB1Q9BQ65 WWOX-216ENST00000569818 525 ntBASIC16.55■□□□□ 0.24
USB1Q9BQ65 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.55■□□□□ 0.24
USB1Q9BQ65 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.55■□□□□ 0.24
USB1Q9BQ65 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
USB1Q9BQ65 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
USB1Q9BQ65 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.55■□□□□ 0.24
USB1Q9BQ65 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
USB1Q9BQ65 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
USB1Q9BQ65 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.55■□□□□ 0.24
USB1Q9BQ65 TREX1-205ENST00000625293 1783 ntBASIC16.55■□□□□ 0.24
USB1Q9BQ65 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
USB1Q9BQ65 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
USB1Q9BQ65 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
USB1Q9BQ65 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
USB1Q9BQ65 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
USB1Q9BQ65 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.55■□□□□ 0.24
USB1Q9BQ65 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
USB1Q9BQ65 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
USB1Q9BQ65 SDHAP1-207ENST00000440850 2000 ntBASIC16.55■□□□□ 0.24
USB1Q9BQ65 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
USB1Q9BQ65 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
USB1Q9BQ65 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
USB1Q9BQ65 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.55■□□□□ 0.24
USB1Q9BQ65 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
USB1Q9BQ65 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
USB1Q9BQ65 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.54■□□□□ 0.24
USB1Q9BQ65 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
USB1Q9BQ65 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.54■□□□□ 0.24
USB1Q9BQ65 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
USB1Q9BQ65 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
USB1Q9BQ65 Z82202.1-201ENST00000623446 1880 ntBASIC16.54■□□□□ 0.24
USB1Q9BQ65 AP000997.3-201ENST00000623333 2250 ntBASIC16.54■□□□□ 0.24
USB1Q9BQ65 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
USB1Q9BQ65 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC16.54■□□□□ 0.24
USB1Q9BQ65 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
USB1Q9BQ65 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
USB1Q9BQ65 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC16.54■□□□□ 0.24
USB1Q9BQ65 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
USB1Q9BQ65 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
USB1Q9BQ65 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
USB1Q9BQ65 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.54■□□□□ 0.24
USB1Q9BQ65 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
USB1Q9BQ65 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
USB1Q9BQ65 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
USB1Q9BQ65 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
USB1Q9BQ65 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
USB1Q9BQ65 ARMC10P1-201ENST00000313754 855 ntBASIC16.54■□□□□ 0.24
USB1Q9BQ65 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
USB1Q9BQ65 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms