Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
COL21A1Q96P44 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.58■□□□□ 0.4
COL21A1Q96P44 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.58■□□□□ 0.4
COL21A1Q96P44 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COL21A1Q96P44 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COL21A1Q96P44 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COL21A1Q96P44 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.58■□□□□ 0.4
COL21A1Q96P44 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
COL21A1Q96P44 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COL21A1Q96P44 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL21A1Q96P44 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.57■□□□□ 0.4
COL21A1Q96P44 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.57■□□□□ 0.4
COL21A1Q96P44 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL21A1Q96P44 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL21A1Q96P44 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL21A1Q96P44 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COL21A1Q96P44 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL21A1Q96P44 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL21A1Q96P44 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COL21A1Q96P44 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL21A1Q96P44 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL21A1Q96P44 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL21A1Q96P44 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
COL21A1Q96P44 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COL21A1Q96P44 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COL21A1Q96P44 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.57■□□□□ 0.4
COL21A1Q96P44 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL21A1Q96P44 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.57■□□□□ 0.4
COL21A1Q96P44 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
COL21A1Q96P44 NOC2LP1-202ENST00000452600 2235 ntBASIC17.57■□□□□ 0.4
COL21A1Q96P44 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.57■□□□□ 0.4
COL21A1Q96P44 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COL21A1Q96P44 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.57■□□□□ 0.4
COL21A1Q96P44 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.57■□□□□ 0.4
COL21A1Q96P44 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL21A1Q96P44 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL21A1Q96P44 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL21A1Q96P44 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.57■□□□□ 0.4
COL21A1Q96P44 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL21A1Q96P44 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COL21A1Q96P44 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.56■□□□□ 0.4
COL21A1Q96P44 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL21A1Q96P44 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.56■□□□□ 0.4
COL21A1Q96P44 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
COL21A1Q96P44 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.56■□□□□ 0.4
COL21A1Q96P44 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
COL21A1Q96P44 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.56■□□□□ 0.4
COL21A1Q96P44 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL21A1Q96P44 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL21A1Q96P44 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL21A1Q96P44 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COL21A1Q96P44 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL21A1Q96P44 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL21A1Q96P44 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.56■□□□□ 0.4
COL21A1Q96P44 CRYGFP-201ENST00000418459 633 ntBASIC17.56■□□□□ 0.4
COL21A1Q96P44 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COL21A1Q96P44 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.56■□□□□ 0.4
COL21A1Q96P44 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
COL21A1Q96P44 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.56■□□□□ 0.4
COL21A1Q96P44 CKBP1-201ENST00000565489 1086 ntBASIC17.56■□□□□ 0.4
COL21A1Q96P44 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.56■□□□□ 0.4
COL21A1Q96P44 AP000525.1-201ENST00000608286 694 ntBASIC17.56■□□□□ 0.4
COL21A1Q96P44 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.56■□□□□ 0.4
COL21A1Q96P44 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL21A1Q96P44 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL21A1Q96P44 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL21A1Q96P44 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.56■□□□□ 0.4
COL21A1Q96P44 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.56■□□□□ 0.4
COL21A1Q96P44 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.56■□□□□ 0.4
COL21A1Q96P44 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL21A1Q96P44 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.56■□□□□ 0.4
COL21A1Q96P44 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
COL21A1Q96P44 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL21A1Q96P44 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL21A1Q96P44 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COL21A1Q96P44 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
COL21A1Q96P44 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL21A1Q96P44 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.55■□□□□ 0.4
COL21A1Q96P44 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
COL21A1Q96P44 AC096733.2-201ENST00000609937 1394 ntBASIC17.55■□□□□ 0.4
COL21A1Q96P44 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL21A1Q96P44 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL21A1Q96P44 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL21A1Q96P44 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL21A1Q96P44 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL21A1Q96P44 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
COL21A1Q96P44 MFAP1P1-201ENST00000442257 1255 ntBASIC17.55■□□□□ 0.4
COL21A1Q96P44 TSPY15P-201ENST00000457163 923 ntBASIC17.55■□□□□ 0.4
COL21A1Q96P44 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL21A1Q96P44 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.55■□□□□ 0.4
COL21A1Q96P44 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.55■□□□□ 0.4
COL21A1Q96P44 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.55■□□□□ 0.4
COL21A1Q96P44 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.55■□□□□ 0.4
COL21A1Q96P44 AP005242.2-201ENST00000580065 1175 ntBASIC17.55■□□□□ 0.4
COL21A1Q96P44 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.55■□□□□ 0.4
COL21A1Q96P44 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
COL21A1Q96P44 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
COL21A1Q96P44 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL21A1Q96P44 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.55■□□□□ 0.4
COL21A1Q96P44 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms