Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 AL606495.2-201ENST00000605867 535 ntBASIC18.19■□□□□ 0.5
CFAP54Q96N23 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
CFAP54Q96N23 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CFAP54Q96N23 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CFAP54Q96N23 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CFAP54Q96N23 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CFAP54Q96N23 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CFAP54Q96N23 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.18■□□□□ 0.5
CFAP54Q96N23 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.18■□□□□ 0.5
CFAP54Q96N23 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.18■□□□□ 0.5
CFAP54Q96N23 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.18■□□□□ 0.5
CFAP54Q96N23 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CFAP54Q96N23 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.18■□□□□ 0.5
CFAP54Q96N23 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CFAP54Q96N23 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CFAP54Q96N23 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CFAP54Q96N23 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.18■□□□□ 0.5
CFAP54Q96N23 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CFAP54Q96N23 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.18■□□□□ 0.5
CFAP54Q96N23 KRT8P3-201ENST00000519669 1449 ntBASIC18.18■□□□□ 0.5
CFAP54Q96N23 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CFAP54Q96N23 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC18.18■□□□□ 0.5
CFAP54Q96N23 AC015922.1-201ENST00000421102 1152 ntBASIC18.18■□□□□ 0.5
CFAP54Q96N23 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CFAP54Q96N23 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CFAP54Q96N23 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CFAP54Q96N23 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CFAP54Q96N23 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CFAP54Q96N23 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.18■□□□□ 0.5
CFAP54Q96N23 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
CFAP54Q96N23 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CFAP54Q96N23 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.17■□□□□ 0.5
CFAP54Q96N23 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.17■□□□□ 0.5
CFAP54Q96N23 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.17■□□□□ 0.5
CFAP54Q96N23 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.17■□□□□ 0.5
CFAP54Q96N23 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CFAP54Q96N23 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.17■□□□□ 0.5
CFAP54Q96N23 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CFAP54Q96N23 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
CFAP54Q96N23 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CFAP54Q96N23 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18.17■□□□□ 0.5
CFAP54Q96N23 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CFAP54Q96N23 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.17■□□□□ 0.5
CFAP54Q96N23 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CFAP54Q96N23 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CFAP54Q96N23 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
CFAP54Q96N23 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CFAP54Q96N23 IGHGP-201ENST00000390555 1178 ntBASIC18.17■□□□□ 0.5
CFAP54Q96N23 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.17■□□□□ 0.5
CFAP54Q96N23 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC18.17■□□□□ 0.5
CFAP54Q96N23 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CFAP54Q96N23 AC005498.2-205ENST00000593218 784 ntBASIC18.17■□□□□ 0.5
CFAP54Q96N23 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.17■□□□□ 0.5
CFAP54Q96N23 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CFAP54Q96N23 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CFAP54Q96N23 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CFAP54Q96N23 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CFAP54Q96N23 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CFAP54Q96N23 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
CFAP54Q96N23 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.16■□□□□ 0.5
CFAP54Q96N23 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.16■□□□□ 0.5
CFAP54Q96N23 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.16■□□□□ 0.5
CFAP54Q96N23 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.16■□□□□ 0.5
CFAP54Q96N23 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CFAP54Q96N23 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC18.16■□□□□ 0.5
CFAP54Q96N23 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.16■□□□□ 0.5
CFAP54Q96N23 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CFAP54Q96N23 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.16■□□□□ 0.5
CFAP54Q96N23 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CFAP54Q96N23 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CFAP54Q96N23 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CFAP54Q96N23 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CFAP54Q96N23 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.16■□□□□ 0.5
CFAP54Q96N23 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC18.16■□□□□ 0.5
CFAP54Q96N23 UNC93B6-202ENST00000528242 690 ntBASIC18.16■□□□□ 0.5
CFAP54Q96N23 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CFAP54Q96N23 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CFAP54Q96N23 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CFAP54Q96N23 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CFAP54Q96N23 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.16■□□□□ 0.5
CFAP54Q96N23 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CFAP54Q96N23 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
CFAP54Q96N23 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CFAP54Q96N23 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CFAP54Q96N23 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CFAP54Q96N23 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.15■□□□□ 0.5
CFAP54Q96N23 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.15■□□□□ 0.5
CFAP54Q96N23 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CFAP54Q96N23 RBM17P3-201ENST00000417687 1192 ntBASIC18.15■□□□□ 0.5
CFAP54Q96N23 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.15■□□□□ 0.5
CFAP54Q96N23 MCCD1P2-201ENST00000423228 335 ntBASIC18.15■□□□□ 0.5
CFAP54Q96N23 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CFAP54Q96N23 AC022494.1-201ENST00000466044 728 ntBASIC18.15■□□□□ 0.5
CFAP54Q96N23 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.15■□□□□ 0.5
CFAP54Q96N23 AC087641.1-201ENST00000557561 1021 ntBASIC18.15■□□□□ 0.5
CFAP54Q96N23 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC18.15■□□□□ 0.5
CFAP54Q96N23 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CFAP54Q96N23 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.15■□□□□ 0.5
CFAP54Q96N23 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CFAP54Q96N23 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms