Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.7■□□□□ 0.42
LRRC58Q96CX6 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC58Q96CX6 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC58Q96CX6 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC58Q96CX6 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC58Q96CX6 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.69■□□□□ 0.42
LRRC58Q96CX6 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC58Q96CX6 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.69■□□□□ 0.42
LRRC58Q96CX6 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC58Q96CX6 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC58Q96CX6 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC58Q96CX6 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC58Q96CX6 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.69■□□□□ 0.42
LRRC58Q96CX6 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC58Q96CX6 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.69■□□□□ 0.42
LRRC58Q96CX6 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.69■□□□□ 0.42
LRRC58Q96CX6 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.69■□□□□ 0.42
LRRC58Q96CX6 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC58Q96CX6 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.69■□□□□ 0.42
LRRC58Q96CX6 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.69■□□□□ 0.42
LRRC58Q96CX6 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.69■□□□□ 0.42
LRRC58Q96CX6 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.69■□□□□ 0.42
LRRC58Q96CX6 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.69■□□□□ 0.42
LRRC58Q96CX6 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC58Q96CX6 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC58Q96CX6 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC58Q96CX6 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
LRRC58Q96CX6 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.69■□□□□ 0.42
LRRC58Q96CX6 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC58Q96CX6 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC58Q96CX6 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC58Q96CX6 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC58Q96CX6 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC58Q96CX6 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC58Q96CX6 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
LRRC58Q96CX6 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
LRRC58Q96CX6 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.68■□□□□ 0.42
LRRC58Q96CX6 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.68■□□□□ 0.42
LRRC58Q96CX6 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC58Q96CX6 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.68■□□□□ 0.42
LRRC58Q96CX6 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.68■□□□□ 0.42
LRRC58Q96CX6 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.68■□□□□ 0.42
LRRC58Q96CX6 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC58Q96CX6 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
LRRC58Q96CX6 AC139713.2-201ENST00000641328 2723 ntBASIC17.68■□□□□ 0.42
LRRC58Q96CX6 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
LRRC58Q96CX6 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC58Q96CX6 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.68■□□□□ 0.42
LRRC58Q96CX6 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC58Q96CX6 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.68■□□□□ 0.42
LRRC58Q96CX6 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.68■□□□□ 0.42
LRRC58Q96CX6 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.68■□□□□ 0.42
LRRC58Q96CX6 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.68■□□□□ 0.42
LRRC58Q96CX6 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.68■□□□□ 0.42
LRRC58Q96CX6 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC58Q96CX6 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.68■□□□□ 0.42
LRRC58Q96CX6 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.68■□□□□ 0.42
LRRC58Q96CX6 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC58Q96CX6 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC58Q96CX6 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC58Q96CX6 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC58Q96CX6 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.67■□□□□ 0.42
LRRC58Q96CX6 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC58Q96CX6 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC58Q96CX6 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC58Q96CX6 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
LRRC58Q96CX6 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC58Q96CX6 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.67■□□□□ 0.42
LRRC58Q96CX6 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC58Q96CX6 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
LRRC58Q96CX6 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC58Q96CX6 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC58Q96CX6 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.67■□□□□ 0.42
LRRC58Q96CX6 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC58Q96CX6 HTR7P1-202ENST00000624664 4411 ntBASIC17.67■□□□□ 0.42
LRRC58Q96CX6 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
LRRC58Q96CX6 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC58Q96CX6 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC58Q96CX6 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
LRRC58Q96CX6 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC58Q96CX6 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
LRRC58Q96CX6 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
LRRC58Q96CX6 PRSS44-201ENST00000515154 1146 ntBASIC17.67■□□□□ 0.42
LRRC58Q96CX6 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.67■□□□□ 0.42
LRRC58Q96CX6 AL138781.1-201ENST00000566567 1274 ntBASIC17.67■□□□□ 0.42
LRRC58Q96CX6 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC58Q96CX6 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.67■□□□□ 0.42
LRRC58Q96CX6 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
LRRC58Q96CX6 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC58Q96CX6 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.67■□□□□ 0.42
LRRC58Q96CX6 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC58Q96CX6 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC58Q96CX6 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.67■□□□□ 0.42
LRRC58Q96CX6 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC58Q96CX6 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC58Q96CX6 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
LRRC58Q96CX6 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC58Q96CX6 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC58Q96CX6 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.67■□□□□ 0.42
LRRC58Q96CX6 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms